Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
APH1AQ96BI3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.45■□□□□ 0.7
APH1AQ96BI3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.45■□□□□ 0.7
APH1AQ96BI3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
APH1AQ96BI3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
APH1AQ96BI3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
APH1AQ96BI3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.45■□□□□ 0.7
APH1AQ96BI3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APH1AQ96BI3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
APH1AQ96BI3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
APH1AQ96BI3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.45■□□□□ 0.7
APH1AQ96BI3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
APH1AQ96BI3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APH1AQ96BI3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
APH1AQ96BI3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APH1AQ96BI3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APH1AQ96BI3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
APH1AQ96BI3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
APH1AQ96BI3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APH1AQ96BI3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APH1AQ96BI3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
APH1AQ96BI3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.44■□□□□ 0.7
APH1AQ96BI3 AP005435.1-201ENST00000529293 1178 ntBASIC19.44■□□□□ 0.7
APH1AQ96BI3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.44■□□□□ 0.7
APH1AQ96BI3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.44■□□□□ 0.7
APH1AQ96BI3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.44■□□□□ 0.7
APH1AQ96BI3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
APH1AQ96BI3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.44■□□□□ 0.7
APH1AQ96BI3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
APH1AQ96BI3 AC068587.7-201ENST00000641602 218 ntBASIC19.44■□□□□ 0.7
APH1AQ96BI3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.44■□□□□ 0.7
APH1AQ96BI3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APH1AQ96BI3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.44■□□□□ 0.7
APH1AQ96BI3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APH1AQ96BI3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APH1AQ96BI3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.44■□□□□ 0.7
APH1AQ96BI3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APH1AQ96BI3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
APH1AQ96BI3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
APH1AQ96BI3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APH1AQ96BI3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
APH1AQ96BI3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APH1AQ96BI3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
APH1AQ96BI3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APH1AQ96BI3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.43■□□□□ 0.7
APH1AQ96BI3 AC105265.2-201ENST00000467189 838 ntBASIC19.43■□□□□ 0.7
APH1AQ96BI3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
APH1AQ96BI3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.43■□□□□ 0.7
APH1AQ96BI3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
APH1AQ96BI3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
APH1AQ96BI3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
APH1AQ96BI3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
APH1AQ96BI3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.43■□□□□ 0.7
APH1AQ96BI3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APH1AQ96BI3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
APH1AQ96BI3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
APH1AQ96BI3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
APH1AQ96BI3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.42■□□□□ 0.7
APH1AQ96BI3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.42■□□□□ 0.7
APH1AQ96BI3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.42■□□□□ 0.7
APH1AQ96BI3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
APH1AQ96BI3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
APH1AQ96BI3 AC087239.1-201ENST00000622671 572 ntBASIC19.42■□□□□ 0.7
APH1AQ96BI3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
APH1AQ96BI3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APH1AQ96BI3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APH1AQ96BI3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APH1AQ96BI3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APH1AQ96BI3 IGHV3-19-201ENST00000521488 291 ntBASIC19.41■□□□□ 0.7
APH1AQ96BI3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APH1AQ96BI3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.41■□□□□ 0.7
APH1AQ96BI3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
APH1AQ96BI3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APH1AQ96BI3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
APH1AQ96BI3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APH1AQ96BI3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
APH1AQ96BI3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APH1AQ96BI3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
APH1AQ96BI3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.4■□□□□ 0.7
APH1AQ96BI3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APH1AQ96BI3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APH1AQ96BI3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APH1AQ96BI3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APH1AQ96BI3 TSPY26P-201ENST00000476365 1326 ntBASIC19.4■□□□□ 0.7
APH1AQ96BI3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APH1AQ96BI3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APH1AQ96BI3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.4■□□□□ 0.7
APH1AQ96BI3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
APH1AQ96BI3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
APH1AQ96BI3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
APH1AQ96BI3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
APH1AQ96BI3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
APH1AQ96BI3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.39■□□□□ 0.7
APH1AQ96BI3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.39■□□□□ 0.69
APH1AQ96BI3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.39■□□□□ 0.69
APH1AQ96BI3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
APH1AQ96BI3 AL031602.1-201ENST00000633169 911 ntBASIC19.39■□□□□ 0.69
APH1AQ96BI3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APH1AQ96BI3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.39■□□□□ 0.69
APH1AQ96BI3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms