Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP9XQ93008 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP9XQ93008 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
USP9XQ93008 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.44■□□□□ 0.7
USP9XQ93008 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.44■□□□□ 0.7
USP9XQ93008 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.44■□□□□ 0.7
USP9XQ93008 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
USP9XQ93008 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.44■□□□□ 0.7
USP9XQ93008 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP9XQ93008 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.43■□□□□ 0.7
USP9XQ93008 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.43■□□□□ 0.7
USP9XQ93008 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP9XQ93008 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
USP9XQ93008 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.43■□□□□ 0.7
USP9XQ93008 AC133041.1-202ENST00000642053 222 ntBASIC19.43■□□□□ 0.7
USP9XQ93008 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP9XQ93008 KRT87P-202ENST00000534226 1464 ntBASIC19.43■□□□□ 0.7
USP9XQ93008 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
USP9XQ93008 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP9XQ93008 AC083880.1-201ENST00000608266 535 ntBASIC19.43■□□□□ 0.7
USP9XQ93008 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.43■□□□□ 0.7
USP9XQ93008 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.43■□□□□ 0.7
USP9XQ93008 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
USP9XQ93008 AC092118.2-201ENST00000613495 667 ntBASIC19.42■□□□□ 0.7
USP9XQ93008 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.42■□□□□ 0.7
USP9XQ93008 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.42■□□□□ 0.7
USP9XQ93008 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
USP9XQ93008 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
USP9XQ93008 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP9XQ93008 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.42■□□□□ 0.7
USP9XQ93008 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP9XQ93008 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
USP9XQ93008 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP9XQ93008 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
USP9XQ93008 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP9XQ93008 FAM210CP-201ENST00000445714 574 ntBASIC19.42■□□□□ 0.7
USP9XQ93008 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.42■□□□□ 0.7
USP9XQ93008 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.42■□□□□ 0.7
USP9XQ93008 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
USP9XQ93008 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP9XQ93008 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP9XQ93008 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.41■□□□□ 0.7
USP9XQ93008 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.41■□□□□ 0.7
USP9XQ93008 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.41■□□□□ 0.7
USP9XQ93008 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
USP9XQ93008 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP9XQ93008 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
USP9XQ93008 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP9XQ93008 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP9XQ93008 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
USP9XQ93008 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.41■□□□□ 0.7
USP9XQ93008 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
USP9XQ93008 AC104187.1-201ENST00000607510 612 ntBASIC19.41■□□□□ 0.7
USP9XQ93008 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.41■□□□□ 0.7
USP9XQ93008 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP9XQ93008 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP9XQ93008 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP9XQ93008 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP9XQ93008 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.4■□□□□ 0.7
USP9XQ93008 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.4■□□□□ 0.7
USP9XQ93008 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
USP9XQ93008 AC092803.2-201ENST00000564287 1899 ntBASIC19.4■□□□□ 0.7
USP9XQ93008 AL161729.1-201ENST00000604104 1402 ntBASIC19.4■□□□□ 0.7
USP9XQ93008 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP9XQ93008 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
USP9XQ93008 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.4■□□□□ 0.7
USP9XQ93008 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.4■□□□□ 0.7
USP9XQ93008 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.4■□□□□ 0.7
USP9XQ93008 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
USP9XQ93008 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.4■□□□□ 0.7
USP9XQ93008 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP9XQ93008 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP9XQ93008 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP9XQ93008 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP9XQ93008 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP9XQ93008 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
USP9XQ93008 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
USP9XQ93008 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.39■□□□□ 0.7
USP9XQ93008 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.39■□□□□ 0.7
USP9XQ93008 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
USP9XQ93008 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.39■□□□□ 0.7
USP9XQ93008 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
USP9XQ93008 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP9XQ93008 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP9XQ93008 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.39■□□□□ 0.69
USP9XQ93008 AC105036.2-201ENST00000569468 176 ntBASIC19.39■□□□□ 0.69
USP9XQ93008 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.39■□□□□ 0.69
USP9XQ93008 AP006294.2-201ENST00000641667 209 ntBASIC19.39■□□□□ 0.69
USP9XQ93008 FP325331.1-202ENST00000623531 1380 ntBASIC19.39■□□□□ 0.69
USP9XQ93008 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP9XQ93008 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.39■□□□□ 0.69
USP9XQ93008 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.39■□□□□ 0.69
USP9XQ93008 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
USP9XQ93008 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.39■□□□□ 0.69
USP9XQ93008 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP9XQ93008 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.38■□□□□ 0.69
USP9XQ93008 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP9XQ93008 AC135731.1-201ENST00000569415 2548 ntBASIC19.38■□□□□ 0.69
USP9XQ93008 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP9XQ93008 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms