Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
SHC3Q92529 AC139530.1-201ENST00000575312 1977 ntBASIC23.54■■□□□ 1.36
SHC3Q92529 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SHC3Q92529 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHC3Q92529 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SHC3Q92529 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.53■■□□□ 1.36
SHC3Q92529 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.53■■□□□ 1.36
SHC3Q92529 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.53■■□□□ 1.36
SHC3Q92529 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
SHC3Q92529 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SHC3Q92529 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.52■■□□□ 1.36
SHC3Q92529 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.52■■□□□ 1.36
SHC3Q92529 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHC3Q92529 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHC3Q92529 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.52■■□□□ 1.36
SHC3Q92529 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
SHC3Q92529 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
SHC3Q92529 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SHC3Q92529 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.52■■□□□ 1.36
SHC3Q92529 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.52■■□□□ 1.36
SHC3Q92529 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.52■■□□□ 1.36
SHC3Q92529 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.52■■□□□ 1.36
SHC3Q92529 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.52■■□□□ 1.36
SHC3Q92529 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
SHC3Q92529 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
SHC3Q92529 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
SHC3Q92529 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
SHC3Q92529 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHC3Q92529 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHC3Q92529 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHC3Q92529 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.51■■□□□ 1.35
SHC3Q92529 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHC3Q92529 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
SHC3Q92529 CA15P2-201ENST00000611168 834 ntBASIC23.51■■□□□ 1.35
SHC3Q92529 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.51■■□□□ 1.35
SHC3Q92529 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.51■■□□□ 1.35
SHC3Q92529 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHC3Q92529 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SHC3Q92529 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHC3Q92529 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHC3Q92529 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHC3Q92529 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
SHC3Q92529 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
SHC3Q92529 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHC3Q92529 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.5■■□□□ 1.35
SHC3Q92529 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
SHC3Q92529 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
SHC3Q92529 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHC3Q92529 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHC3Q92529 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHC3Q92529 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SHC3Q92529 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHC3Q92529 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHC3Q92529 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHC3Q92529 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHC3Q92529 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SHC3Q92529 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.49■■□□□ 1.35
SHC3Q92529 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.49■■□□□ 1.35
SHC3Q92529 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHC3Q92529 AC137767.1-201ENST00000602918 1920 ntBASIC23.49■■□□□ 1.35
SHC3Q92529 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.49■■□□□ 1.35
SHC3Q92529 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SHC3Q92529 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SHC3Q92529 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
SHC3Q92529 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SHC3Q92529 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
SHC3Q92529 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SHC3Q92529 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
SHC3Q92529 AL031602.1-201ENST00000633169 911 ntBASIC23.48■■□□□ 1.35
SHC3Q92529 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SHC3Q92529 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
SHC3Q92529 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SHC3Q92529 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SHC3Q92529 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SHC3Q92529 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SHC3Q92529 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SHC3Q92529 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SHC3Q92529 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.47■■□□□ 1.35
SHC3Q92529 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SHC3Q92529 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.47■■□□□ 1.35
SHC3Q92529 SERBP1P1-201ENST00000396021 1160 ntBASIC23.47■■□□□ 1.35
SHC3Q92529 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SHC3Q92529 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.47■■□□□ 1.35
SHC3Q92529 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SHC3Q92529 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SHC3Q92529 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
SHC3Q92529 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.47■■□□□ 1.35
SHC3Q92529 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SHC3Q92529 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.47■■□□□ 1.35
SHC3Q92529 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SHC3Q92529 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SHC3Q92529 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.47■■□□□ 1.35
SHC3Q92529 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.47■■□□□ 1.35
SHC3Q92529 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.46■■□□□ 1.35
SHC3Q92529 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
SHC3Q92529 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.46■■□□□ 1.35
SHC3Q92529 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SHC3Q92529 AL138724.1-201ENST00000606771 1088 ntBASIC23.46■■□□□ 1.35
SHC3Q92529 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
SHC3Q92529 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.45■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms