Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CASKIN1Q8WXD9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CASKIN1Q8WXD9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC34.64■■■■□ 3.14
CASKIN1Q8WXD9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
CASKIN1Q8WXD9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC34.64■■■■□ 3.14
CASKIN1Q8WXD9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC34.64■■■■□ 3.14
CASKIN1Q8WXD9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CASKIN1Q8WXD9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC34.64■■■■□ 3.14
CASKIN1Q8WXD9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CASKIN1Q8WXD9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC34.64■■■■□ 3.14
CASKIN1Q8WXD9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
CASKIN1Q8WXD9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC34.64■■■■□ 3.14
CASKIN1Q8WXD9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC34.64■■■■□ 3.14
CASKIN1Q8WXD9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
CASKIN1Q8WXD9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
CASKIN1Q8WXD9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
CASKIN1Q8WXD9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
CASKIN1Q8WXD9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC34.63■■■■□ 3.13
CASKIN1Q8WXD9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC34.63■■■■□ 3.13
CASKIN1Q8WXD9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
CASKIN1Q8WXD9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC34.62■■■■□ 3.13
CASKIN1Q8WXD9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
CASKIN1Q8WXD9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
CASKIN1Q8WXD9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC34.62■■■■□ 3.13
CASKIN1Q8WXD9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC34.61■■■■□ 3.13
CASKIN1Q8WXD9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC34.61■■■■□ 3.13
CASKIN1Q8WXD9 AC010141.3-201ENST00000456659 717 ntBASIC34.61■■■■□ 3.13
CASKIN1Q8WXD9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC34.6■■■■□ 3.13
CASKIN1Q8WXD9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
CASKIN1Q8WXD9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC34.6■■■■□ 3.13
CASKIN1Q8WXD9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC34.6■■■■□ 3.13
CASKIN1Q8WXD9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
CASKIN1Q8WXD9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC34.6■■■■□ 3.13
CASKIN1Q8WXD9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC34.6■■■■□ 3.13
CASKIN1Q8WXD9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC34.6■■■■□ 3.13
CASKIN1Q8WXD9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC34.6■■■■□ 3.13
CASKIN1Q8WXD9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC34.59■■■■□ 3.13
CASKIN1Q8WXD9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC34.59■■■■□ 3.13
CASKIN1Q8WXD9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC34.59■■■■□ 3.13
CASKIN1Q8WXD9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
CASKIN1Q8WXD9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC34.59■■■■□ 3.13
CASKIN1Q8WXD9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC34.59■■■■□ 3.13
CASKIN1Q8WXD9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC34.59■■■■□ 3.13
CASKIN1Q8WXD9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CASKIN1Q8WXD9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CASKIN1Q8WXD9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CASKIN1Q8WXD9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CASKIN1Q8WXD9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC34.58■■■■□ 3.13
CASKIN1Q8WXD9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC34.58■■■■□ 3.13
CASKIN1Q8WXD9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC34.58■■■■□ 3.13
CASKIN1Q8WXD9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CASKIN1Q8WXD9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
CASKIN1Q8WXD9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
CASKIN1Q8WXD9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC34.57■■■■□ 3.13
CASKIN1Q8WXD9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC34.57■■■■□ 3.13
CASKIN1Q8WXD9 AC004911.1-201ENST00000416316 871 ntBASIC34.57■■■■□ 3.13
CASKIN1Q8WXD9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC34.57■■■■□ 3.13
CASKIN1Q8WXD9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC34.57■■■■□ 3.13
CASKIN1Q8WXD9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC34.56■■■■□ 3.12
CASKIN1Q8WXD9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC34.56■■■■□ 3.12
CASKIN1Q8WXD9 AC006015.1-201ENST00000429970 570 ntBASIC34.56■■■■□ 3.12
CASKIN1Q8WXD9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC34.56■■■■□ 3.12
CASKIN1Q8WXD9 BX005040.4-201ENST00000637145 1518 ntBASIC34.56■■■■□ 3.12
CASKIN1Q8WXD9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
CASKIN1Q8WXD9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC34.55■■■■□ 3.12
CASKIN1Q8WXD9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC34.55■■■■□ 3.12
CASKIN1Q8WXD9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
CASKIN1Q8WXD9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC34.55■■■■□ 3.12
CASKIN1Q8WXD9 AC087239.1-201ENST00000622671 572 ntBASIC34.55■■■■□ 3.12
CASKIN1Q8WXD9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC34.54■■■■□ 3.12
CASKIN1Q8WXD9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC34.54■■■■□ 3.12
CASKIN1Q8WXD9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
CASKIN1Q8WXD9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC34.54■■■■□ 3.12
CASKIN1Q8WXD9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
CASKIN1Q8WXD9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC34.53■■■■□ 3.12
CASKIN1Q8WXD9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC34.53■■■■□ 3.12
CASKIN1Q8WXD9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC34.53■■■■□ 3.12
CASKIN1Q8WXD9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC34.53■■■■□ 3.12
CASKIN1Q8WXD9 GXYLT1P2-201ENST00000433312 1230 ntBASIC34.53■■■■□ 3.12
CASKIN1Q8WXD9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC34.53■■■■□ 3.12
CASKIN1Q8WXD9 AC092068.2-201ENST00000590491 1708 ntBASIC34.53■■■■□ 3.12
CASKIN1Q8WXD9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC34.53■■■■□ 3.12
CASKIN1Q8WXD9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
CASKIN1Q8WXD9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
CASKIN1Q8WXD9 DUSP8P3-201ENST00000399571 1760 ntBASIC34.52■■■■□ 3.12
CASKIN1Q8WXD9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC34.52■■■■□ 3.12
CASKIN1Q8WXD9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC34.52■■■■□ 3.12
CASKIN1Q8WXD9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC34.52■■■■□ 3.12
CASKIN1Q8WXD9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC34.52■■■■□ 3.12
CASKIN1Q8WXD9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC34.52■■■■□ 3.12
CASKIN1Q8WXD9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC34.52■■■■□ 3.12
CASKIN1Q8WXD9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC34.51■■■■□ 3.12
CASKIN1Q8WXD9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC34.51■■■■□ 3.12
CASKIN1Q8WXD9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
CASKIN1Q8WXD9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
CASKIN1Q8WXD9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
CASKIN1Q8WXD9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC34.5■■■■□ 3.11
CASKIN1Q8WXD9 AP004607.4-201ENST00000530158 1459 ntBASIC34.5■■■■□ 3.11
CASKIN1Q8WXD9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
CASKIN1Q8WXD9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC34.5■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms