Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMIM4Q8WVI0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SMIM4Q8WVI0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMIM4Q8WVI0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMIM4Q8WVI0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMIM4Q8WVI0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SMIM4Q8WVI0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
SMIM4Q8WVI0 LINC01521-201ENST00000504184 1943 ntBASIC18.8■□□□□ 0.6
SMIM4Q8WVI0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SMIM4Q8WVI0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.8■□□□□ 0.6
SMIM4Q8WVI0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.79■□□□□ 0.6
SMIM4Q8WVI0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM4Q8WVI0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM4Q8WVI0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM4Q8WVI0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM4Q8WVI0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM4Q8WVI0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM4Q8WVI0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SMIM4Q8WVI0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM4Q8WVI0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM4Q8WVI0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.79■□□□□ 0.6
SMIM4Q8WVI0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.79■□□□□ 0.6
SMIM4Q8WVI0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.79■□□□□ 0.6
SMIM4Q8WVI0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.79■□□□□ 0.6
SMIM4Q8WVI0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM4Q8WVI0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM4Q8WVI0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.78■□□□□ 0.6
SMIM4Q8WVI0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM4Q8WVI0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM4Q8WVI0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM4Q8WVI0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM4Q8WVI0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SMIM4Q8WVI0 AC087393.1-201ENST00000582896 145 ntBASIC18.78■□□□□ 0.6
SMIM4Q8WVI0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SMIM4Q8WVI0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.78■□□□□ 0.6
SMIM4Q8WVI0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.78■□□□□ 0.6
SMIM4Q8WVI0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM4Q8WVI0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM4Q8WVI0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM4Q8WVI0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SMIM4Q8WVI0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM4Q8WVI0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.77■□□□□ 0.6
SMIM4Q8WVI0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.77■□□□□ 0.6
SMIM4Q8WVI0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM4Q8WVI0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM4Q8WVI0 AL157384.1-201ENST00000445995 2473 ntBASIC18.77■□□□□ 0.59
SMIM4Q8WVI0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMIM4Q8WVI0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.77■□□□□ 0.59
SMIM4Q8WVI0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMIM4Q8WVI0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 AC009831.1-201ENST00000580420 1582 ntBASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.76■□□□□ 0.59
SMIM4Q8WVI0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM4Q8WVI0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM4Q8WVI0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SMIM4Q8WVI0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SMIM4Q8WVI0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM4Q8WVI0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM4Q8WVI0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SMIM4Q8WVI0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM4Q8WVI0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM4Q8WVI0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM4Q8WVI0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM4Q8WVI0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM4Q8WVI0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM4Q8WVI0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SMIM4Q8WVI0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SMIM4Q8WVI0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SMIM4Q8WVI0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.74■□□□□ 0.59
SMIM4Q8WVI0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM4Q8WVI0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM4Q8WVI0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM4Q8WVI0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM4Q8WVI0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM4Q8WVI0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
SMIM4Q8WVI0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM4Q8WVI0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM4Q8WVI0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM4Q8WVI0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.74■□□□□ 0.59
SMIM4Q8WVI0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.74■□□□□ 0.59
SMIM4Q8WVI0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM4Q8WVI0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms