Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC27.13■■□□□ 1.93
SNED1Q8TER0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SNED1Q8TER0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SNED1Q8TER0 AC138932.3-201ENST00000567634 1902 ntBASIC27.12■■□□□ 1.93
SNED1Q8TER0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SNED1Q8TER0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SNED1Q8TER0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SNED1Q8TER0 AP003733.4-201ENST00000623785 1697 ntBASIC27.12■■□□□ 1.93
SNED1Q8TER0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
SNED1Q8TER0 KRT19P1-201ENST00000405746 1186 ntBASIC27.12■■□□□ 1.93
SNED1Q8TER0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC27.12■■□□□ 1.93
SNED1Q8TER0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SNED1Q8TER0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC27.12■■□□□ 1.93
SNED1Q8TER0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.12■■□□□ 1.93
SNED1Q8TER0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
SNED1Q8TER0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC27.11■■□□□ 1.93
SNED1Q8TER0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC27.11■■□□□ 1.93
SNED1Q8TER0 GUSBP6-202ENST00000438529 1198 ntBASIC27.11■■□□□ 1.93
SNED1Q8TER0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC27.11■■□□□ 1.93
SNED1Q8TER0 MFSD11-216ENST00000590393 1141 ntBASIC27.11■■□□□ 1.93
SNED1Q8TER0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC27.11■■□□□ 1.93
SNED1Q8TER0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SNED1Q8TER0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC27.11■■□□□ 1.93
SNED1Q8TER0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNED1Q8TER0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
SNED1Q8TER0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC27.1■■□□□ 1.93
SNED1Q8TER0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNED1Q8TER0 AC142381.3-201ENST00000568208 1670 ntBASIC27.1■■□□□ 1.93
SNED1Q8TER0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNED1Q8TER0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNED1Q8TER0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNED1Q8TER0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNED1Q8TER0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNED1Q8TER0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNED1Q8TER0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
SNED1Q8TER0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC27.09■■□□□ 1.93
SNED1Q8TER0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC27.09■■□□□ 1.93
SNED1Q8TER0 AC011767.1-201ENST00000617410 1153 ntBASIC27.09■■□□□ 1.93
SNED1Q8TER0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
SNED1Q8TER0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNED1Q8TER0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNED1Q8TER0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SNED1Q8TER0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNED1Q8TER0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC27.09■■□□□ 1.93
SNED1Q8TER0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC27.08■■□□□ 1.93
SNED1Q8TER0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
SNED1Q8TER0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SNED1Q8TER0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC27.08■■□□□ 1.93
SNED1Q8TER0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SNED1Q8TER0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
SNED1Q8TER0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SNED1Q8TER0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SNED1Q8TER0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SNED1Q8TER0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SNED1Q8TER0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SNED1Q8TER0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC27.07■■□□□ 1.92
SNED1Q8TER0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
SNED1Q8TER0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC27.07■■□□□ 1.92
SNED1Q8TER0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC27.07■■□□□ 1.92
SNED1Q8TER0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SNED1Q8TER0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC27.07■■□□□ 1.92
SNED1Q8TER0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SNED1Q8TER0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SNED1Q8TER0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC27.07■■□□□ 1.92
SNED1Q8TER0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SNED1Q8TER0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
SNED1Q8TER0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SNED1Q8TER0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SNED1Q8TER0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.06■■□□□ 1.92
SNED1Q8TER0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC27.06■■□□□ 1.92
SNED1Q8TER0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SNED1Q8TER0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
SNED1Q8TER0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNED1Q8TER0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
SNED1Q8TER0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNED1Q8TER0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC27.05■■□□□ 1.92
SNED1Q8TER0 KRT18P11-201ENST00000435214 1283 ntBASIC27.05■■□□□ 1.92
SNED1Q8TER0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC27.05■■□□□ 1.92
SNED1Q8TER0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
SNED1Q8TER0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC27.04■■□□□ 1.92
SNED1Q8TER0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SNED1Q8TER0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
SNED1Q8TER0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SNED1Q8TER0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
SNED1Q8TER0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
SNED1Q8TER0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC27.03■■□□□ 1.92
SNED1Q8TER0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC27.03■■□□□ 1.92
SNED1Q8TER0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SNED1Q8TER0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC27.03■■□□□ 1.92
SNED1Q8TER0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC27.03■■□□□ 1.92
SNED1Q8TER0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC27.03■■□□□ 1.92
SNED1Q8TER0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC27.03■■□□□ 1.92
SNED1Q8TER0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SNED1Q8TER0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SNED1Q8TER0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SNED1Q8TER0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC27.02■■□□□ 1.92
SNED1Q8TER0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
SNED1Q8TER0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SNED1Q8TER0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SNED1Q8TER0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms