Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC26.3■■□□□ 1.8
SH3RF3Q8TEJ3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.3■■□□□ 1.8
SH3RF3Q8TEJ3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
SH3RF3Q8TEJ3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.29■■□□□ 1.8
SH3RF3Q8TEJ3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.29■■□□□ 1.8
SH3RF3Q8TEJ3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
SH3RF3Q8TEJ3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC26.29■■□□□ 1.8
SH3RF3Q8TEJ3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SH3RF3Q8TEJ3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SH3RF3Q8TEJ3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SH3RF3Q8TEJ3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SH3RF3Q8TEJ3 AC092068.2-201ENST00000590491 1708 ntBASIC26.28■■□□□ 1.8
SH3RF3Q8TEJ3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SH3RF3Q8TEJ3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC26.28■■□□□ 1.8
SH3RF3Q8TEJ3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.28■■□□□ 1.8
SH3RF3Q8TEJ3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SH3RF3Q8TEJ3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SH3RF3Q8TEJ3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SH3RF3Q8TEJ3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC26.28■■□□□ 1.8
SH3RF3Q8TEJ3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SH3RF3Q8TEJ3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SH3RF3Q8TEJ3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SH3RF3Q8TEJ3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SH3RF3Q8TEJ3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SH3RF3Q8TEJ3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SH3RF3Q8TEJ3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SH3RF3Q8TEJ3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.27■■□□□ 1.8
SH3RF3Q8TEJ3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
SH3RF3Q8TEJ3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SH3RF3Q8TEJ3 TERF1P2-201ENST00000583350 1212 ntBASIC26.27■■□□□ 1.8
SH3RF3Q8TEJ3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SH3RF3Q8TEJ3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
SH3RF3Q8TEJ3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SH3RF3Q8TEJ3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.27■■□□□ 1.8
SH3RF3Q8TEJ3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SH3RF3Q8TEJ3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SH3RF3Q8TEJ3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC26.26■■□□□ 1.79
SH3RF3Q8TEJ3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SH3RF3Q8TEJ3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SH3RF3Q8TEJ3 KRT18P14-201ENST00000534205 1250 ntBASIC26.26■■□□□ 1.79
SH3RF3Q8TEJ3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SH3RF3Q8TEJ3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SH3RF3Q8TEJ3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
SH3RF3Q8TEJ3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
SH3RF3Q8TEJ3 LINC02228-203ENST00000641970 1355 ntBASIC26.25■■□□□ 1.79
SH3RF3Q8TEJ3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SH3RF3Q8TEJ3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.25■■□□□ 1.79
SH3RF3Q8TEJ3 AC022517.1-201ENST00000592429 346 ntBASIC26.25■■□□□ 1.79
SH3RF3Q8TEJ3 IKBKGP1-201ENST00000612193 1073 ntBASIC26.25■■□□□ 1.79
SH3RF3Q8TEJ3 AC068587.7-201ENST00000641602 218 ntBASIC26.25■■□□□ 1.79
SH3RF3Q8TEJ3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
SH3RF3Q8TEJ3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.25■■□□□ 1.79
SH3RF3Q8TEJ3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SH3RF3Q8TEJ3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SH3RF3Q8TEJ3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
SH3RF3Q8TEJ3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.24■■□□□ 1.79
SH3RF3Q8TEJ3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SH3RF3Q8TEJ3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SH3RF3Q8TEJ3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SH3RF3Q8TEJ3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
SH3RF3Q8TEJ3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SH3RF3Q8TEJ3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SH3RF3Q8TEJ3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SH3RF3Q8TEJ3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.23■■□□□ 1.79
SH3RF3Q8TEJ3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SH3RF3Q8TEJ3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
SH3RF3Q8TEJ3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SH3RF3Q8TEJ3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SH3RF3Q8TEJ3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SH3RF3Q8TEJ3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.23■■□□□ 1.79
SH3RF3Q8TEJ3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.23■■□□□ 1.79
SH3RF3Q8TEJ3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SH3RF3Q8TEJ3 AC010141.3-201ENST00000456659 717 ntBASIC26.23■■□□□ 1.79
SH3RF3Q8TEJ3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.23■■□□□ 1.79
SH3RF3Q8TEJ3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
SH3RF3Q8TEJ3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SH3RF3Q8TEJ3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SH3RF3Q8TEJ3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SH3RF3Q8TEJ3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.22■■□□□ 1.79
SH3RF3Q8TEJ3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.22■■□□□ 1.79
SH3RF3Q8TEJ3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
SH3RF3Q8TEJ3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SH3RF3Q8TEJ3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.22■■□□□ 1.79
SH3RF3Q8TEJ3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC26.22■■□□□ 1.79
SH3RF3Q8TEJ3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.22■■□□□ 1.79
SH3RF3Q8TEJ3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.22■■□□□ 1.79
SH3RF3Q8TEJ3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.22■■□□□ 1.79
SH3RF3Q8TEJ3 DUSP8P3-201ENST00000399571 1760 ntBASIC26.22■■□□□ 1.79
SH3RF3Q8TEJ3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SH3RF3Q8TEJ3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
SH3RF3Q8TEJ3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SH3RF3Q8TEJ3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.21■■□□□ 1.79
SH3RF3Q8TEJ3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.21■■□□□ 1.79
SH3RF3Q8TEJ3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SH3RF3Q8TEJ3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC26.21■■□□□ 1.79
SH3RF3Q8TEJ3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
SH3RF3Q8TEJ3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
SH3RF3Q8TEJ3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SH3RF3Q8TEJ3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.21■■□□□ 1.79
SH3RF3Q8TEJ3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms