Protein–RNA interactions for Protein: Q8NEP9

ZNF555, Zinc finger protein 555, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF555Q8NEP9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF555Q8NEP9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF555Q8NEP9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF555Q8NEP9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ZNF555Q8NEP9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF555Q8NEP9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF555Q8NEP9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF555Q8NEP9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF555Q8NEP9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ZNF555Q8NEP9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF555Q8NEP9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.34■□□□□ 0.85
ZNF555Q8NEP9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF555Q8NEP9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.34■□□□□ 0.85
ZNF555Q8NEP9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF555Q8NEP9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF555Q8NEP9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF555Q8NEP9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF555Q8NEP9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF555Q8NEP9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.34■□□□□ 0.85
ZNF555Q8NEP9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.34■□□□□ 0.85
ZNF555Q8NEP9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.34■□□□□ 0.85
ZNF555Q8NEP9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF555Q8NEP9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF555Q8NEP9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ZNF555Q8NEP9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF555Q8NEP9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF555Q8NEP9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF555Q8NEP9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.85
ZNF555Q8NEP9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.33■□□□□ 0.85
ZNF555Q8NEP9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF555Q8NEP9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.33■□□□□ 0.85
ZNF555Q8NEP9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.33■□□□□ 0.85
ZNF555Q8NEP9 AC073130.3-201ENST00000624389 2278 ntBASIC20.33■□□□□ 0.84
ZNF555Q8NEP9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF555Q8NEP9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF555Q8NEP9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF555Q8NEP9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF555Q8NEP9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF555Q8NEP9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF555Q8NEP9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF555Q8NEP9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.32■□□□□ 0.84
ZNF555Q8NEP9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.32■□□□□ 0.84
ZNF555Q8NEP9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF555Q8NEP9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF555Q8NEP9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF555Q8NEP9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF555Q8NEP9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF555Q8NEP9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.32■□□□□ 0.84
ZNF555Q8NEP9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF555Q8NEP9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF555Q8NEP9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF555Q8NEP9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF555Q8NEP9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF555Q8NEP9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.31■□□□□ 0.84
ZNF555Q8NEP9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ZNF555Q8NEP9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF555Q8NEP9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF555Q8NEP9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.31■□□□□ 0.84
ZNF555Q8NEP9 AC005229.4-201ENST00000610085 2198 ntBASIC20.31■□□□□ 0.84
ZNF555Q8NEP9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ZNF555Q8NEP9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ZNF555Q8NEP9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF555Q8NEP9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.31■□□□□ 0.84
ZNF555Q8NEP9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ZNF555Q8NEP9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF555Q8NEP9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF555Q8NEP9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ZNF555Q8NEP9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF555Q8NEP9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ZNF555Q8NEP9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.3■□□□□ 0.84
ZNF555Q8NEP9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.3■□□□□ 0.84
ZNF555Q8NEP9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF555Q8NEP9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF555Q8NEP9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF555Q8NEP9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF555Q8NEP9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF555Q8NEP9 AC018755.3-202ENST00000596210 929 ntBASIC20.3■□□□□ 0.84
ZNF555Q8NEP9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.3■□□□□ 0.84
ZNF555Q8NEP9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.3■□□□□ 0.84
ZNF555Q8NEP9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.3■□□□□ 0.84
ZNF555Q8NEP9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF555Q8NEP9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF555Q8NEP9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF555Q8NEP9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF555Q8NEP9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF555Q8NEP9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF555Q8NEP9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF555Q8NEP9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF555Q8NEP9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ZNF555Q8NEP9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF555Q8NEP9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF555Q8NEP9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ZNF555Q8NEP9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF555Q8NEP9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF555Q8NEP9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF555Q8NEP9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF555Q8NEP9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF555Q8NEP9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
ZNF555Q8NEP9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
ZNF555Q8NEP9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms