Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RETREG2Q8NC44 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RETREG2Q8NC44 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RETREG2Q8NC44 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.88■■□□□ 1.57
RETREG2Q8NC44 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.88■■□□□ 1.57
RETREG2Q8NC44 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.88■■□□□ 1.57
RETREG2Q8NC44 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RETREG2Q8NC44 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
RETREG2Q8NC44 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.88■■□□□ 1.57
RETREG2Q8NC44 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
RETREG2Q8NC44 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
RETREG2Q8NC44 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.87■■□□□ 1.57
RETREG2Q8NC44 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RETREG2Q8NC44 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.87■■□□□ 1.57
RETREG2Q8NC44 SLC47A1P1-202ENST00000449666 945 ntBASIC24.87■■□□□ 1.57
RETREG2Q8NC44 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RETREG2Q8NC44 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.87■■□□□ 1.57
RETREG2Q8NC44 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RETREG2Q8NC44 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
RETREG2Q8NC44 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 FP325331.1-202ENST00000623531 1380 ntBASIC24.86■■□□□ 1.57
RETREG2Q8NC44 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 AL031602.1-201ENST00000633169 911 ntBASIC24.86■■□□□ 1.57
RETREG2Q8NC44 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RETREG2Q8NC44 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
RETREG2Q8NC44 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.85■■□□□ 1.57
RETREG2Q8NC44 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.85■■□□□ 1.57
RETREG2Q8NC44 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.85■■□□□ 1.57
RETREG2Q8NC44 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
RETREG2Q8NC44 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
RETREG2Q8NC44 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RETREG2Q8NC44 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RETREG2Q8NC44 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RETREG2Q8NC44 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.84■■□□□ 1.57
RETREG2Q8NC44 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.84■■□□□ 1.57
RETREG2Q8NC44 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.84■■□□□ 1.57
RETREG2Q8NC44 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.84■■□□□ 1.57
RETREG2Q8NC44 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RETREG2Q8NC44 AC123595.1-201ENST00000440769 1046 ntBASIC24.84■■□□□ 1.57
RETREG2Q8NC44 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
RETREG2Q8NC44 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.84■■□□□ 1.57
RETREG2Q8NC44 DUSP8P3-201ENST00000399571 1760 ntBASIC24.84■■□□□ 1.57
RETREG2Q8NC44 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RETREG2Q8NC44 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.84■■□□□ 1.57
RETREG2Q8NC44 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RETREG2Q8NC44 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.84■■□□□ 1.57
RETREG2Q8NC44 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RETREG2Q8NC44 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
RETREG2Q8NC44 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.84■■□□□ 1.57
RETREG2Q8NC44 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RETREG2Q8NC44 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
RETREG2Q8NC44 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
RETREG2Q8NC44 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RETREG2Q8NC44 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
RETREG2Q8NC44 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RETREG2Q8NC44 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.83■■□□□ 1.57
RETREG2Q8NC44 DUX4L2-201ENST00000561772 1275 ntBASIC24.83■■□□□ 1.57
RETREG2Q8NC44 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.83■■□□□ 1.57
RETREG2Q8NC44 DUX4L6-201ENST00000626483 1275 ntBASIC24.83■■□□□ 1.57
RETREG2Q8NC44 DUX4L1-201ENST00000627662 1275 ntBASIC24.83■■□□□ 1.57
RETREG2Q8NC44 DUX4L8-201ENST00000629013 1275 ntBASIC24.83■■□□□ 1.57
RETREG2Q8NC44 DUX4L3-201ENST00000630187 1275 ntBASIC24.83■■□□□ 1.57
RETREG2Q8NC44 DUX4L7-201ENST00000630678 1275 ntBASIC24.83■■□□□ 1.57
RETREG2Q8NC44 DUX4L5-201ENST00000630834 1275 ntBASIC24.83■■□□□ 1.57
RETREG2Q8NC44 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RETREG2Q8NC44 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.83■■□□□ 1.56
RETREG2Q8NC44 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
RETREG2Q8NC44 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RETREG2Q8NC44 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RETREG2Q8NC44 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.82■■□□□ 1.56
RETREG2Q8NC44 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.82■■□□□ 1.56
RETREG2Q8NC44 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
RETREG2Q8NC44 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.82■■□□□ 1.56
RETREG2Q8NC44 AC027612.3-201ENST00000413684 1047 ntBASIC24.82■■□□□ 1.56
RETREG2Q8NC44 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
RETREG2Q8NC44 IGHV3-19-201ENST00000521488 291 ntBASIC24.82■■□□□ 1.56
RETREG2Q8NC44 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RETREG2Q8NC44 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.82■■□□□ 1.56
RETREG2Q8NC44 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RETREG2Q8NC44 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.82■■□□□ 1.56
RETREG2Q8NC44 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.82■■□□□ 1.56
RETREG2Q8NC44 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RETREG2Q8NC44 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
RETREG2Q8NC44 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms