Protein–RNA interactions for Protein: Q8IXL7

MSRB3, Methionine-R-sulfoxide reductase B3, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3Q8IXL7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.74■□□□□ 0.91
MSRB3Q8IXL7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MSRB3Q8IXL7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MSRB3Q8IXL7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.74■□□□□ 0.91
MSRB3Q8IXL7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MSRB3Q8IXL7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MSRB3Q8IXL7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MSRB3Q8IXL7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MSRB3Q8IXL7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MSRB3Q8IXL7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
MSRB3Q8IXL7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.74■□□□□ 0.91
MSRB3Q8IXL7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.74■□□□□ 0.91
MSRB3Q8IXL7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.74■□□□□ 0.91
MSRB3Q8IXL7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MSRB3Q8IXL7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MSRB3Q8IXL7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSRB3Q8IXL7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSRB3Q8IXL7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.73■□□□□ 0.91
MSRB3Q8IXL7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MSRB3Q8IXL7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSRB3Q8IXL7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.73■□□□□ 0.91
MSRB3Q8IXL7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
MSRB3Q8IXL7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.73■□□□□ 0.91
MSRB3Q8IXL7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MSRB3Q8IXL7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSRB3Q8IXL7 AC026310.3-201ENST00000625186 2373 ntBASIC20.73■□□□□ 0.91
MSRB3Q8IXL7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSRB3Q8IXL7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSRB3Q8IXL7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MSRB3Q8IXL7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MSRB3Q8IXL7 AC009086.3-201ENST00000623486 1008 ntBASIC20.72■□□□□ 0.91
MSRB3Q8IXL7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.72■□□□□ 0.91
MSRB3Q8IXL7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MSRB3Q8IXL7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MSRB3Q8IXL7 FAM99A-202ENST00000538190 1989 ntBASIC20.72■□□□□ 0.91
MSRB3Q8IXL7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSRB3Q8IXL7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.71■□□□□ 0.91
MSRB3Q8IXL7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MSRB3Q8IXL7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MSRB3Q8IXL7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSRB3Q8IXL7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
MSRB3Q8IXL7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MSRB3Q8IXL7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.71■□□□□ 0.91
MSRB3Q8IXL7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.71■□□□□ 0.91
MSRB3Q8IXL7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MSRB3Q8IXL7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSRB3Q8IXL7 AC009102.2-201ENST00000606772 1639 ntBASIC20.71■□□□□ 0.91
MSRB3Q8IXL7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.7■□□□□ 0.91
MSRB3Q8IXL7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
MSRB3Q8IXL7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSRB3Q8IXL7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
MSRB3Q8IXL7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.7■□□□□ 0.9
MSRB3Q8IXL7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
MSRB3Q8IXL7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.7■□□□□ 0.9
MSRB3Q8IXL7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.7■□□□□ 0.9
MSRB3Q8IXL7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.7■□□□□ 0.9
MSRB3Q8IXL7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSRB3Q8IXL7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.7■□□□□ 0.9
MSRB3Q8IXL7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSRB3Q8IXL7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MSRB3Q8IXL7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSRB3Q8IXL7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.69■□□□□ 0.9
MSRB3Q8IXL7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
MSRB3Q8IXL7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.69■□□□□ 0.9
MSRB3Q8IXL7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.69■□□□□ 0.9
MSRB3Q8IXL7 AC004687.1-201ENST00000579003 1625 ntBASIC20.69■□□□□ 0.9
MSRB3Q8IXL7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MSRB3Q8IXL7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.69■□□□□ 0.9
MSRB3Q8IXL7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSRB3Q8IXL7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MSRB3Q8IXL7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSRB3Q8IXL7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MSRB3Q8IXL7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSRB3Q8IXL7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSRB3Q8IXL7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSRB3Q8IXL7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
MSRB3Q8IXL7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.68■□□□□ 0.9
MSRB3Q8IXL7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSRB3Q8IXL7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSRB3Q8IXL7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.68■□□□□ 0.9
MSRB3Q8IXL7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 BX664725.1-201ENST00000438252 379 ntBASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 CA15P2-201ENST00000611168 834 ntBASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.67■□□□□ 0.9
MSRB3Q8IXL7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms