Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SCN4BQ8IWT1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCN4BQ8IWT1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCN4BQ8IWT1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCN4BQ8IWT1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCN4BQ8IWT1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.2■■□□□ 1.3
SCN4BQ8IWT1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCN4BQ8IWT1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCN4BQ8IWT1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.2■■□□□ 1.3
SCN4BQ8IWT1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCN4BQ8IWT1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.2■■□□□ 1.3
SCN4BQ8IWT1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCN4BQ8IWT1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SCN4BQ8IWT1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.19■■□□□ 1.3
SCN4BQ8IWT1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCN4BQ8IWT1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.19■■□□□ 1.3
SCN4BQ8IWT1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCN4BQ8IWT1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCN4BQ8IWT1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.19■■□□□ 1.3
SCN4BQ8IWT1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.19■■□□□ 1.3
SCN4BQ8IWT1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.19■■□□□ 1.3
SCN4BQ8IWT1 AC012414.1-201ENST00000556676 535 ntBASIC23.19■■□□□ 1.3
SCN4BQ8IWT1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.19■■□□□ 1.3
SCN4BQ8IWT1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.19■■□□□ 1.3
SCN4BQ8IWT1 AL358852.1-201ENST00000623174 1268 ntBASIC23.19■■□□□ 1.3
SCN4BQ8IWT1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCN4BQ8IWT1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCN4BQ8IWT1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
SCN4BQ8IWT1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCN4BQ8IWT1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SCN4BQ8IWT1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SCN4BQ8IWT1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCN4BQ8IWT1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SCN4BQ8IWT1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.18■■□□□ 1.3
SCN4BQ8IWT1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.18■■□□□ 1.3
SCN4BQ8IWT1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.18■■□□□ 1.3
SCN4BQ8IWT1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCN4BQ8IWT1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SCN4BQ8IWT1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.18■■□□□ 1.3
SCN4BQ8IWT1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SCN4BQ8IWT1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SCN4BQ8IWT1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SCN4BQ8IWT1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SCN4BQ8IWT1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCN4BQ8IWT1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.17■■□□□ 1.3
SCN4BQ8IWT1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SCN4BQ8IWT1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCN4BQ8IWT1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCN4BQ8IWT1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.17■■□□□ 1.3
SCN4BQ8IWT1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SCN4BQ8IWT1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SCN4BQ8IWT1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SCN4BQ8IWT1 AL354811.1-201ENST00000610286 706 ntBASIC23.16■■□□□ 1.3
SCN4BQ8IWT1 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.16■■□□□ 1.3
SCN4BQ8IWT1 AC068587.7-201ENST00000641602 218 ntBASIC23.16■■□□□ 1.3
SCN4BQ8IWT1 AC105233.4-201ENST00000642045 216 ntBASIC23.16■■□□□ 1.3
SCN4BQ8IWT1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SCN4BQ8IWT1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SCN4BQ8IWT1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SCN4BQ8IWT1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.16■■□□□ 1.3
SCN4BQ8IWT1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SCN4BQ8IWT1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SCN4BQ8IWT1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.16■■□□□ 1.3
SCN4BQ8IWT1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.15■■□□□ 1.3
SCN4BQ8IWT1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.15■■□□□ 1.3
SCN4BQ8IWT1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
SCN4BQ8IWT1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SCN4BQ8IWT1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SCN4BQ8IWT1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.15■■□□□ 1.3
SCN4BQ8IWT1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SCN4BQ8IWT1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.15■■□□□ 1.3
SCN4BQ8IWT1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SCN4BQ8IWT1 AC087239.1-201ENST00000622671 572 ntBASIC23.15■■□□□ 1.3
SCN4BQ8IWT1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SCN4BQ8IWT1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.15■■□□□ 1.3
SCN4BQ8IWT1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SCN4BQ8IWT1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SCN4BQ8IWT1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
SCN4BQ8IWT1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SCN4BQ8IWT1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.15■■□□□ 1.3
SCN4BQ8IWT1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SCN4BQ8IWT1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SCN4BQ8IWT1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SCN4BQ8IWT1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SCN4BQ8IWT1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SCN4BQ8IWT1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
SCN4BQ8IWT1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.14■■□□□ 1.29
SCN4BQ8IWT1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.14■■□□□ 1.29
SCN4BQ8IWT1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SCN4BQ8IWT1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.14■■□□□ 1.29
SCN4BQ8IWT1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.14■■□□□ 1.29
SCN4BQ8IWT1 AL031602.1-201ENST00000633169 911 ntBASIC23.14■■□□□ 1.29
SCN4BQ8IWT1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SCN4BQ8IWT1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SCN4BQ8IWT1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SCN4BQ8IWT1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SCN4BQ8IWT1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
SCN4BQ8IWT1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SCN4BQ8IWT1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SCN4BQ8IWT1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms