Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC71Q8IV32 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC71Q8IV32 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC71Q8IV32 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC71Q8IV32 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC71Q8IV32 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC71Q8IV32 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC71Q8IV32 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC71Q8IV32 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC71Q8IV32 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC71Q8IV32 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC71Q8IV32 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC71Q8IV32 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC71Q8IV32 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC71Q8IV32 ESRRAP2-201ENST00000418437 1549 ntBASIC20.54■□□□□ 0.88
CCDC71Q8IV32 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC71Q8IV32 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC71Q8IV32 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC71Q8IV32 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC71Q8IV32 AC142381.2-201ENST00000566120 298 ntBASIC20.54■□□□□ 0.88
CCDC71Q8IV32 AL136162.1-201ENST00000607711 1078 ntBASIC20.54■□□□□ 0.88
CCDC71Q8IV32 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
CCDC71Q8IV32 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC71Q8IV32 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC71Q8IV32 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC71Q8IV32 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC71Q8IV32 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC71Q8IV32 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC71Q8IV32 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC71Q8IV32 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC71Q8IV32 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC71Q8IV32 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC71Q8IV32 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC71Q8IV32 ZNRF2P3-201ENST00000424200 374 ntBASIC20.53■□□□□ 0.88
CCDC71Q8IV32 SRD5A1P1-201ENST00000442297 786 ntBASIC20.53■□□□□ 0.88
CCDC71Q8IV32 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC71Q8IV32 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC71Q8IV32 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CCDC71Q8IV32 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC71Q8IV32 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC71Q8IV32 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC71Q8IV32 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC71Q8IV32 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC71Q8IV32 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CCDC71Q8IV32 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC71Q8IV32 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC71Q8IV32 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC71Q8IV32 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC71Q8IV32 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC71Q8IV32 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC71Q8IV32 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC71Q8IV32 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC71Q8IV32 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC71Q8IV32 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC71Q8IV32 AC139530.1-201ENST00000575312 1977 ntBASIC20.52■□□□□ 0.87
CCDC71Q8IV32 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.52■□□□□ 0.87
CCDC71Q8IV32 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC71Q8IV32 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC71Q8IV32 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC71Q8IV32 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC71Q8IV32 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC71Q8IV32 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CCDC71Q8IV32 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC71Q8IV32 AC004448.1-201ENST00000458332 883 ntBASIC20.51■□□□□ 0.87
CCDC71Q8IV32 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC71Q8IV32 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC71Q8IV32 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC71Q8IV32 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC71Q8IV32 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC71Q8IV32 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC71Q8IV32 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC71Q8IV32 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC71Q8IV32 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.5■□□□□ 0.87
CCDC71Q8IV32 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC71Q8IV32 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC71Q8IV32 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC71Q8IV32 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC71Q8IV32 AL022069.1-201ENST00000568025 1636 ntBASIC20.49■□□□□ 0.87
CCDC71Q8IV32 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC71Q8IV32 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC71Q8IV32 ALDH1A3-203ENST00000557963 1670 ntBASIC20.49■□□□□ 0.87
CCDC71Q8IV32 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCDC71Q8IV32 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC71Q8IV32 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC71Q8IV32 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC71Q8IV32 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CCDC71Q8IV32 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC71Q8IV32 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC71Q8IV32 AC135279.3-201ENST00000610945 1311 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms