Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
VPS36Q86VN1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
VPS36Q86VN1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
VPS36Q86VN1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS36Q86VN1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS36Q86VN1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
VPS36Q86VN1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS36Q86VN1 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.62■■□□□ 1.37
VPS36Q86VN1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
VPS36Q86VN1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS36Q86VN1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.62■■□□□ 1.37
VPS36Q86VN1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS36Q86VN1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS36Q86VN1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS36Q86VN1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS36Q86VN1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS36Q86VN1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS36Q86VN1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS36Q86VN1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.61■■□□□ 1.37
VPS36Q86VN1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
VPS36Q86VN1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.61■■□□□ 1.37
VPS36Q86VN1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
VPS36Q86VN1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.61■■□□□ 1.37
VPS36Q86VN1 AC239859.2-201ENST00000444165 318 ntBASIC23.61■■□□□ 1.37
VPS36Q86VN1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.61■■□□□ 1.37
VPS36Q86VN1 MIR4787-201ENST00000607364 84 ntBASIC23.61■■□□□ 1.37
VPS36Q86VN1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.61■■□□□ 1.37
VPS36Q86VN1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
VPS36Q86VN1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
VPS36Q86VN1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
VPS36Q86VN1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
VPS36Q86VN1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
VPS36Q86VN1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
VPS36Q86VN1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.6■■□□□ 1.37
VPS36Q86VN1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
VPS36Q86VN1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
VPS36Q86VN1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
VPS36Q86VN1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
VPS36Q86VN1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
VPS36Q86VN1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
VPS36Q86VN1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.6■■□□□ 1.37
VPS36Q86VN1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
VPS36Q86VN1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
VPS36Q86VN1 AC080038.3-201ENST00000623346 1952 ntBASIC23.6■■□□□ 1.37
VPS36Q86VN1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS36Q86VN1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS36Q86VN1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
VPS36Q86VN1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
VPS36Q86VN1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS36Q86VN1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.59■■□□□ 1.37
VPS36Q86VN1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
VPS36Q86VN1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS36Q86VN1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS36Q86VN1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
VPS36Q86VN1 C11orf96-202ENST00000528572 1834 ntBASIC23.59■■□□□ 1.37
VPS36Q86VN1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
VPS36Q86VN1 AC009102.2-201ENST00000606772 1639 ntBASIC23.59■■□□□ 1.37
VPS36Q86VN1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
VPS36Q86VN1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
VPS36Q86VN1 LINC01960-201ENST00000563759 1884 ntBASIC23.58■■□□□ 1.37
VPS36Q86VN1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
VPS36Q86VN1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
VPS36Q86VN1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
VPS36Q86VN1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
VPS36Q86VN1 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.58■■□□□ 1.37
VPS36Q86VN1 GUSBP5-201ENST00000418136 578 ntBASIC23.58■■□□□ 1.37
VPS36Q86VN1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
VPS36Q86VN1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.58■■□□□ 1.37
VPS36Q86VN1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.58■■□□□ 1.37
VPS36Q86VN1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
VPS36Q86VN1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
VPS36Q86VN1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
VPS36Q86VN1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.36
VPS36Q86VN1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
VPS36Q86VN1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
VPS36Q86VN1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VPS36Q86VN1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
VPS36Q86VN1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
VPS36Q86VN1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.57■■□□□ 1.36
VPS36Q86VN1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
VPS36Q86VN1 AC010997.5-201ENST00000609182 354 ntBASIC23.57■■□□□ 1.36
VPS36Q86VN1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.57■■□□□ 1.36
VPS36Q86VN1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VPS36Q86VN1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.57■■□□□ 1.36
VPS36Q86VN1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.57■■□□□ 1.36
VPS36Q86VN1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VPS36Q86VN1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
VPS36Q86VN1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VPS36Q86VN1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS36Q86VN1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.56■■□□□ 1.36
VPS36Q86VN1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.56■■□□□ 1.36
VPS36Q86VN1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
VPS36Q86VN1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS36Q86VN1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS36Q86VN1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS36Q86VN1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS36Q86VN1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.55■■□□□ 1.36
VPS36Q86VN1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS36Q86VN1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS36Q86VN1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms