Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX53Q86TM3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
DDX53Q86TM3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.49■■□□□ 1.35
DDX53Q86TM3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX53Q86TM3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DDX53Q86TM3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.49■■□□□ 1.35
DDX53Q86TM3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.49■■□□□ 1.35
DDX53Q86TM3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
DDX53Q86TM3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.48■■□□□ 1.35
DDX53Q86TM3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
DDX53Q86TM3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
DDX53Q86TM3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.48■■□□□ 1.35
DDX53Q86TM3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.48■■□□□ 1.35
DDX53Q86TM3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
DDX53Q86TM3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.48■■□□□ 1.35
DDX53Q86TM3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.48■■□□□ 1.35
DDX53Q86TM3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX53Q86TM3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX53Q86TM3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX53Q86TM3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.47■■□□□ 1.35
DDX53Q86TM3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.47■■□□□ 1.35
DDX53Q86TM3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.47■■□□□ 1.35
DDX53Q86TM3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DDX53Q86TM3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DDX53Q86TM3 AC080038.1-201ENST00000611274 1154 ntBASIC23.47■■□□□ 1.35
DDX53Q86TM3 AC087239.1-201ENST00000622671 572 ntBASIC23.47■■□□□ 1.35
DDX53Q86TM3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DDX53Q86TM3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX53Q86TM3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX53Q86TM3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX53Q86TM3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
DDX53Q86TM3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX53Q86TM3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DDX53Q86TM3 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.46■■□□□ 1.35
DDX53Q86TM3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
DDX53Q86TM3 LINC01124-201ENST00000409786 2117 ntBASIC23.46■■□□□ 1.35
DDX53Q86TM3 AC010141.3-201ENST00000456659 717 ntBASIC23.46■■□□□ 1.35
DDX53Q86TM3 AP004607.4-201ENST00000530158 1459 ntBASIC23.46■■□□□ 1.35
DDX53Q86TM3 AC137761.2-201ENST00000561729 223 ntBASIC23.46■■□□□ 1.35
DDX53Q86TM3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.46■■□□□ 1.35
DDX53Q86TM3 AC145350.3-201ENST00000569033 163 ntBASIC23.46■■□□□ 1.35
DDX53Q86TM3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX53Q86TM3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX53Q86TM3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
DDX53Q86TM3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
DDX53Q86TM3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
DDX53Q86TM3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
DDX53Q86TM3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.45■■□□□ 1.34
DDX53Q86TM3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
DDX53Q86TM3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.45■■□□□ 1.34
DDX53Q86TM3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
DDX53Q86TM3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.45■■□□□ 1.34
DDX53Q86TM3 AC016769.1-201ENST00000409132 1010 ntBASIC23.45■■□□□ 1.34
DDX53Q86TM3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.45■■□□□ 1.34
DDX53Q86TM3 SMUG1P1-201ENST00000590640 811 ntBASIC23.45■■□□□ 1.34
DDX53Q86TM3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.45■■□□□ 1.34
DDX53Q86TM3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.45■■□□□ 1.34
DDX53Q86TM3 AL353803.4-201ENST00000565882 1934 ntBASIC23.45■■□□□ 1.34
DDX53Q86TM3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.45■■□□□ 1.34
DDX53Q86TM3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
DDX53Q86TM3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.44■■□□□ 1.34
DDX53Q86TM3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
DDX53Q86TM3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
DDX53Q86TM3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.44■■□□□ 1.34
DDX53Q86TM3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
DDX53Q86TM3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.44■■□□□ 1.34
DDX53Q86TM3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
DDX53Q86TM3 AC004812.2-201ENST00000611079 2094 ntBASIC23.44■■□□□ 1.34
DDX53Q86TM3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.43■■□□□ 1.34
DDX53Q86TM3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
DDX53Q86TM3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
DDX53Q86TM3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
DDX53Q86TM3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
DDX53Q86TM3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.43■■□□□ 1.34
DDX53Q86TM3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.43■■□□□ 1.34
DDX53Q86TM3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
DDX53Q86TM3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.43■■□□□ 1.34
DDX53Q86TM3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
DDX53Q86TM3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
DDX53Q86TM3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
DDX53Q86TM3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
DDX53Q86TM3 AC004854.2-201ENST00000608450 1441 ntBASIC23.42■■□□□ 1.34
DDX53Q86TM3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
DDX53Q86TM3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
DDX53Q86TM3 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.42■■□□□ 1.34
DDX53Q86TM3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.42■■□□□ 1.34
DDX53Q86TM3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
DDX53Q86TM3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
DDX53Q86TM3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
DDX53Q86TM3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
DDX53Q86TM3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.42■■□□□ 1.34
DDX53Q86TM3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
DDX53Q86TM3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
DDX53Q86TM3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.42■■□□□ 1.34
DDX53Q86TM3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.42■■□□□ 1.34
DDX53Q86TM3 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.42■■□□□ 1.34
DDX53Q86TM3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.42■■□□□ 1.34
DDX53Q86TM3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
DDX53Q86TM3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
DDX53Q86TM3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms