Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBA1AQ71U36 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.16■□□□□ 0.82
TUBA1AQ71U36 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBA1AQ71U36 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.15■□□□□ 0.82
TUBA1AQ71U36 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBA1AQ71U36 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TUBA1AQ71U36 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBA1AQ71U36 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.15■□□□□ 0.82
TUBA1AQ71U36 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.15■□□□□ 0.82
TUBA1AQ71U36 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBA1AQ71U36 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.15■□□□□ 0.82
TUBA1AQ71U36 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBA1AQ71U36 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBA1AQ71U36 AC092053.2-201ENST00000640557 1818 ntBASIC20.15■□□□□ 0.82
TUBA1AQ71U36 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBA1AQ71U36 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBA1AQ71U36 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBA1AQ71U36 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TUBA1AQ71U36 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
TUBA1AQ71U36 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.14■□□□□ 0.81
TUBA1AQ71U36 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TUBA1AQ71U36 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TUBA1AQ71U36 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.14■□□□□ 0.81
TUBA1AQ71U36 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TUBA1AQ71U36 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TUBA1AQ71U36 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
TUBA1AQ71U36 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.14■□□□□ 0.81
TUBA1AQ71U36 SNX5-217ENST00000606557 1087 ntBASIC20.14■□□□□ 0.81
TUBA1AQ71U36 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TUBA1AQ71U36 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TUBA1AQ71U36 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TUBA1AQ71U36 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TUBA1AQ71U36 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.13■□□□□ 0.81
TUBA1AQ71U36 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TUBA1AQ71U36 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TUBA1AQ71U36 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.13■□□□□ 0.81
TUBA1AQ71U36 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.13■□□□□ 0.81
TUBA1AQ71U36 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TUBA1AQ71U36 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.13■□□□□ 0.81
TUBA1AQ71U36 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.13■□□□□ 0.81
TUBA1AQ71U36 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TUBA1AQ71U36 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TUBA1AQ71U36 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TUBA1AQ71U36 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TUBA1AQ71U36 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TUBA1AQ71U36 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TUBA1AQ71U36 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TUBA1AQ71U36 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TUBA1AQ71U36 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TUBA1AQ71U36 KRT16P3-201ENST00000439127 1283 ntBASIC20.12■□□□□ 0.81
TUBA1AQ71U36 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TUBA1AQ71U36 MTDHP2-201ENST00000601468 714 ntBASIC20.12■□□□□ 0.81
TUBA1AQ71U36 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.12■□□□□ 0.81
TUBA1AQ71U36 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TUBA1AQ71U36 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
TUBA1AQ71U36 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TUBA1AQ71U36 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TUBA1AQ71U36 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TUBA1AQ71U36 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.11■□□□□ 0.81
TUBA1AQ71U36 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 AL356441.2-201ENST00000443009 864 ntBASIC20.11■□□□□ 0.81
TUBA1AQ71U36 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 AL022069.1-201ENST00000568025 1636 ntBASIC20.11■□□□□ 0.81
TUBA1AQ71U36 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TUBA1AQ71U36 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.1■□□□□ 0.81
TUBA1AQ71U36 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBA1AQ71U36 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
TUBA1AQ71U36 AC010997.5-201ENST00000609182 354 ntBASIC20.1■□□□□ 0.81
TUBA1AQ71U36 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TUBA1AQ71U36 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBA1AQ71U36 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TUBA1AQ71U36 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBA1AQ71U36 FBXW4P1-201ENST00000426721 2239 ntBASIC20.1■□□□□ 0.81
TUBA1AQ71U36 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.09■□□□□ 0.81
TUBA1AQ71U36 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TUBA1AQ71U36 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1AQ71U36 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1AQ71U36 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.09■□□□□ 0.81
TUBA1AQ71U36 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1AQ71U36 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1AQ71U36 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms