Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
COLCA1Q6ZS62 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
COLCA1Q6ZS62 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COLCA1Q6ZS62 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COLCA1Q6ZS62 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COLCA1Q6ZS62 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
COLCA1Q6ZS62 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COLCA1Q6ZS62 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COLCA1Q6ZS62 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COLCA1Q6ZS62 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COLCA1Q6ZS62 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COLCA1Q6ZS62 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COLCA1Q6ZS62 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COLCA1Q6ZS62 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
COLCA1Q6ZS62 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
COLCA1Q6ZS62 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
COLCA1Q6ZS62 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.97■□□□□ 0.63
COLCA1Q6ZS62 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
COLCA1Q6ZS62 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COLCA1Q6ZS62 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
COLCA1Q6ZS62 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
COLCA1Q6ZS62 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COLCA1Q6ZS62 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COLCA1Q6ZS62 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COLCA1Q6ZS62 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.96■□□□□ 0.63
COLCA1Q6ZS62 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.96■□□□□ 0.63
COLCA1Q6ZS62 AC136469.2-201ENST00000623944 1028 ntBASIC18.96■□□□□ 0.63
COLCA1Q6ZS62 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
COLCA1Q6ZS62 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.96■□□□□ 0.63
COLCA1Q6ZS62 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COLCA1Q6ZS62 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COLCA1Q6ZS62 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COLCA1Q6ZS62 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
COLCA1Q6ZS62 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COLCA1Q6ZS62 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COLCA1Q6ZS62 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.95■□□□□ 0.62
COLCA1Q6ZS62 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COLCA1Q6ZS62 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
COLCA1Q6ZS62 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.95■□□□□ 0.62
COLCA1Q6ZS62 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COLCA1Q6ZS62 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COLCA1Q6ZS62 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.95■□□□□ 0.62
COLCA1Q6ZS62 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COLCA1Q6ZS62 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
COLCA1Q6ZS62 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COLCA1Q6ZS62 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COLCA1Q6ZS62 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COLCA1Q6ZS62 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.95■□□□□ 0.62
COLCA1Q6ZS62 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 AC079834.2-201ENST00000609776 1949 ntBASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 AC137767.1-201ENST00000602918 1920 ntBASIC18.94■□□□□ 0.62
COLCA1Q6ZS62 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COLCA1Q6ZS62 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.93■□□□□ 0.62
COLCA1Q6ZS62 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLCA1Q6ZS62 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLCA1Q6ZS62 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COLCA1Q6ZS62 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLCA1Q6ZS62 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLCA1Q6ZS62 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLCA1Q6ZS62 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLCA1Q6ZS62 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
COLCA1Q6ZS62 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.93■□□□□ 0.62
COLCA1Q6ZS62 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.93■□□□□ 0.62
COLCA1Q6ZS62 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.93■□□□□ 0.62
COLCA1Q6ZS62 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLCA1Q6ZS62 AC080038.3-201ENST00000623346 1952 ntBASIC18.93■□□□□ 0.62
COLCA1Q6ZS62 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COLCA1Q6ZS62 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COLCA1Q6ZS62 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.92■□□□□ 0.62
COLCA1Q6ZS62 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COLCA1Q6ZS62 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.92■□□□□ 0.62
COLCA1Q6ZS62 AC139530.1-201ENST00000575312 1977 ntBASIC18.92■□□□□ 0.62
COLCA1Q6ZS62 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
COLCA1Q6ZS62 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.92■□□□□ 0.62
COLCA1Q6ZS62 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.92■□□□□ 0.62
COLCA1Q6ZS62 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COLCA1Q6ZS62 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.92■□□□□ 0.62
COLCA1Q6ZS62 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
COLCA1Q6ZS62 AC068587.7-201ENST00000641602 218 ntBASIC18.92■□□□□ 0.62
COLCA1Q6ZS62 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COLCA1Q6ZS62 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COLCA1Q6ZS62 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms