Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 AC068587.7-201ENST00000641602 218 ntBASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 HLA-L-211ENST00000482052 1765 ntBASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHISA2Q6UWI4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 AC079140.4-201ENST00000507448 529 ntBASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHISA2Q6UWI4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA2Q6UWI4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA2Q6UWI4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA2Q6UWI4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA2Q6UWI4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA2Q6UWI4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHISA2Q6UWI4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SHISA2Q6UWI4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.1■□□□□ 0.33
SHISA2Q6UWI4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA2Q6UWI4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SHISA2Q6UWI4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.09■□□□□ 0.33
SHISA2Q6UWI4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA2Q6UWI4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA2Q6UWI4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.09■□□□□ 0.33
SHISA2Q6UWI4 AC007322.1-201ENST00000426983 750 ntBASIC17.09■□□□□ 0.33
SHISA2Q6UWI4 AC093827.2-201ENST00000512654 315 ntBASIC17.09■□□□□ 0.33
SHISA2Q6UWI4 AC087239.1-201ENST00000622671 572 ntBASIC17.09■□□□□ 0.33
SHISA2Q6UWI4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA2Q6UWI4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA2Q6UWI4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA2Q6UWI4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA2Q6UWI4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA2Q6UWI4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHISA2Q6UWI4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SHISA2Q6UWI4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHISA2Q6UWI4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHISA2Q6UWI4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SHISA2Q6UWI4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHISA2Q6UWI4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SHISA2Q6UWI4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SHISA2Q6UWI4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHISA2Q6UWI4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHISA2Q6UWI4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.08■□□□□ 0.32
SHISA2Q6UWI4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.08■□□□□ 0.32
SHISA2Q6UWI4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.08■□□□□ 0.32
SHISA2Q6UWI4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHISA2Q6UWI4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHISA2Q6UWI4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA2Q6UWI4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA2Q6UWI4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA2Q6UWI4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.07■□□□□ 0.32
SHISA2Q6UWI4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA2Q6UWI4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA2Q6UWI4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA2Q6UWI4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA2Q6UWI4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.07■□□□□ 0.32
SHISA2Q6UWI4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHISA2Q6UWI4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.07■□□□□ 0.32
SHISA2Q6UWI4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.07■□□□□ 0.32
SHISA2Q6UWI4 MFSD11-216ENST00000590393 1141 ntBASIC17.07■□□□□ 0.32
SHISA2Q6UWI4 AC005181.1-201ENST00000604782 1256 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms