Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CASC1Q6TDU7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CASC1Q6TDU7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CASC1Q6TDU7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CASC1Q6TDU7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
CASC1Q6TDU7 C17orf82-201ENST00000623772 1530 ntBASIC26.8■■□□□ 1.88
CASC1Q6TDU7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CASC1Q6TDU7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CASC1Q6TDU7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.8■■□□□ 1.88
CASC1Q6TDU7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.8■■□□□ 1.88
CASC1Q6TDU7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CASC1Q6TDU7 AC092053.2-201ENST00000640557 1818 ntBASIC26.8■■□□□ 1.88
CASC1Q6TDU7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CASC1Q6TDU7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CASC1Q6TDU7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
CASC1Q6TDU7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CASC1Q6TDU7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CASC1Q6TDU7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
CASC1Q6TDU7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.8■■□□□ 1.88
CASC1Q6TDU7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CASC1Q6TDU7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.79■■□□□ 1.88
CASC1Q6TDU7 LINC01960-201ENST00000563759 1884 ntBASIC26.79■■□□□ 1.88
CASC1Q6TDU7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
CASC1Q6TDU7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CASC1Q6TDU7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CASC1Q6TDU7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
CASC1Q6TDU7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CASC1Q6TDU7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.79■■□□□ 1.88
CASC1Q6TDU7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.79■■□□□ 1.88
CASC1Q6TDU7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CASC1Q6TDU7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.79■■□□□ 1.88
CASC1Q6TDU7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CASC1Q6TDU7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC26.79■■□□□ 1.88
CASC1Q6TDU7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CASC1Q6TDU7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
CASC1Q6TDU7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.78■■□□□ 1.88
CASC1Q6TDU7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
CASC1Q6TDU7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CASC1Q6TDU7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
CASC1Q6TDU7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CASC1Q6TDU7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.78■■□□□ 1.88
CASC1Q6TDU7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CASC1Q6TDU7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.78■■□□□ 1.88
CASC1Q6TDU7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
CASC1Q6TDU7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
CASC1Q6TDU7 AC139530.1-201ENST00000575312 1977 ntBASIC26.77■■□□□ 1.88
CASC1Q6TDU7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.77■■□□□ 1.88
CASC1Q6TDU7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CASC1Q6TDU7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC26.77■■□□□ 1.88
CASC1Q6TDU7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.77■■□□□ 1.88
CASC1Q6TDU7 KRT16P3-201ENST00000439127 1283 ntBASIC26.77■■□□□ 1.88
CASC1Q6TDU7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CASC1Q6TDU7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CASC1Q6TDU7 MIR6724-1-201ENST00000616420 92 ntBASIC26.77■■□□□ 1.88
CASC1Q6TDU7 MIR6724-2-201ENST00000616483 92 ntBASIC26.77■■□□□ 1.88
CASC1Q6TDU7 MIR6724-4-201ENST00000617390 92 ntBASIC26.77■■□□□ 1.88
CASC1Q6TDU7 MIR6724-3-201ENST00000622482 92 ntBASIC26.77■■□□□ 1.88
CASC1Q6TDU7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CASC1Q6TDU7 AC080038.3-201ENST00000623346 1952 ntBASIC26.77■■□□□ 1.88
CASC1Q6TDU7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.88
CASC1Q6TDU7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.88
CASC1Q6TDU7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
CASC1Q6TDU7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.76■■□□□ 1.87
CASC1Q6TDU7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.76■■□□□ 1.87
CASC1Q6TDU7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CASC1Q6TDU7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
CASC1Q6TDU7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
CASC1Q6TDU7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.76■■□□□ 1.87
CASC1Q6TDU7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC26.75■■□□□ 1.87
CASC1Q6TDU7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
CASC1Q6TDU7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CASC1Q6TDU7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
CASC1Q6TDU7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.75■■□□□ 1.87
CASC1Q6TDU7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CASC1Q6TDU7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC26.75■■□□□ 1.87
CASC1Q6TDU7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CASC1Q6TDU7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CASC1Q6TDU7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CASC1Q6TDU7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CASC1Q6TDU7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.75■■□□□ 1.87
CASC1Q6TDU7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.75■■□□□ 1.87
CASC1Q6TDU7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC26.75■■□□□ 1.87
CASC1Q6TDU7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CASC1Q6TDU7 AC004687.1-201ENST00000579003 1625 ntBASIC26.75■■□□□ 1.87
CASC1Q6TDU7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CASC1Q6TDU7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
CASC1Q6TDU7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CASC1Q6TDU7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CASC1Q6TDU7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CASC1Q6TDU7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
CASC1Q6TDU7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.74■■□□□ 1.87
CASC1Q6TDU7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.74■■□□□ 1.87
CASC1Q6TDU7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.74■■□□□ 1.87
CASC1Q6TDU7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
CASC1Q6TDU7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.74■■□□□ 1.87
CASC1Q6TDU7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CASC1Q6TDU7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CASC1Q6TDU7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CASC1Q6TDU7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.74■■□□□ 1.87
CASC1Q6TDU7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms