Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LINC00242Q5T6M2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
LINC00242Q5T6M2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00242Q5T6M2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LINC00242Q5T6M2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00242Q5T6M2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
LINC00242Q5T6M2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 DUX4L18-201ENST00000553347 1267 ntBASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00242Q5T6M2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00242Q5T6M2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
LINC00242Q5T6M2 REST-206ENST00000612429 1376 ntTSL 5 BASIC15□□□□□ -0.01
LINC00242Q5T6M2 REST-207ENST00000616975 1370 ntTSL 5 BASIC15□□□□□ -0.01
LINC00242Q5T6M2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC00242Q5T6M2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15□□□□□ -0.01
LINC00242Q5T6M2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC00242Q5T6M2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LINC00242Q5T6M2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00242Q5T6M2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00242Q5T6M2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC15□□□□□ -0.01
LINC00242Q5T6M2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15□□□□□ -0.01
LINC00242Q5T6M2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00242Q5T6M2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00242Q5T6M2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15□□□□□ -0.01
LINC00242Q5T6M2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00242Q5T6M2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00242Q5T6M2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15□□□□□ -0.01
LINC00242Q5T6M2 LINC01529-204ENST00000636474 1715 ntBASIC15□□□□□ -0.01
LINC00242Q5T6M2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15□□□□□ -0.01
LINC00242Q5T6M2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00242Q5T6M2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC00242Q5T6M2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LINC00242Q5T6M2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LINC00242Q5T6M2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00242Q5T6M2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LINC00242Q5T6M2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00242Q5T6M2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00242Q5T6M2 LINC01960-201ENST00000563759 1884 ntBASIC14.98□□□□□ -0.01
LINC00242Q5T6M2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00242Q5T6M2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC00242Q5T6M2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00242Q5T6M2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00242Q5T6M2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00242Q5T6M2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00242Q5T6M2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC00242Q5T6M2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LINC00242Q5T6M2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00242Q5T6M2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00242Q5T6M2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC00242Q5T6M2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00242Q5T6M2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LINC00242Q5T6M2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC14.97□□□□□ -0.01
LINC00242Q5T6M2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC14.97□□□□□ -0.01
LINC00242Q5T6M2 BHLHE23-202ENST00000612929 1109 ntBASIC14.97□□□□□ -0.01
LINC00242Q5T6M2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00242Q5T6M2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LINC00242Q5T6M2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC00242Q5T6M2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00242Q5T6M2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms