Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.33□□□□□ -0.44
UBR4Q5T4S7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UBR4Q5T4S7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBR4Q5T4S7 AC055733.4-201ENST00000638462 1354 ntBASIC12.33□□□□□ -0.44
UBR4Q5T4S7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC12.32□□□□□ -0.44
UBR4Q5T4S7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBR4Q5T4S7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
UBR4Q5T4S7 MYC-209ENST00000641252 345 ntBASIC12.31□□□□□ -0.44
UBR4Q5T4S7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBR4Q5T4S7 AC093787.1-201ENST00000450396 207 ntBASIC12.31□□□□□ -0.44
UBR4Q5T4S7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC12.31□□□□□ -0.44
UBR4Q5T4S7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC12.31□□□□□ -0.44
UBR4Q5T4S7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC12.31□□□□□ -0.44
UBR4Q5T4S7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBR4Q5T4S7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBR4Q5T4S7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBR4Q5T4S7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
UBR4Q5T4S7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBR4Q5T4S7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBR4Q5T4S7 LINC02084-201ENST00000606069 1096 ntBASIC12.31□□□□□ -0.44
UBR4Q5T4S7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBR4Q5T4S7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBR4Q5T4S7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC12.3□□□□□ -0.44
UBR4Q5T4S7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBR4Q5T4S7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC12.3□□□□□ -0.44
UBR4Q5T4S7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC12.3□□□□□ -0.44
UBR4Q5T4S7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC12.3□□□□□ -0.44
UBR4Q5T4S7 AC092865.7-201ENST00000641832 219 ntBASIC12.3□□□□□ -0.44
UBR4Q5T4S7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBR4Q5T4S7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
UBR4Q5T4S7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBR4Q5T4S7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBR4Q5T4S7 C1QBPP2-201ENST00000528754 825 ntBASIC12.3□□□□□ -0.44
UBR4Q5T4S7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBR4Q5T4S7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBR4Q5T4S7 AP000347.1-202ENST00000435868 847 ntBASIC12.3□□□□□ -0.44
UBR4Q5T4S7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC12.3□□□□□ -0.44
UBR4Q5T4S7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.3□□□□□ -0.44
UBR4Q5T4S7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC12.3□□□□□ -0.44
UBR4Q5T4S7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
UBR4Q5T4S7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBR4Q5T4S7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC12.3□□□□□ -0.44
UBR4Q5T4S7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBR4Q5T4S7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 AC004263.2-201ENST00000617183 678 ntBASIC12.29□□□□□ -0.44
UBR4Q5T4S7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.29□□□□□ -0.44
UBR4Q5T4S7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBR4Q5T4S7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
UBR4Q5T4S7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBR4Q5T4S7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC12.28□□□□□ -0.44
UBR4Q5T4S7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
UBR4Q5T4S7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBR4Q5T4S7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC12.28□□□□□ -0.44
UBR4Q5T4S7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBR4Q5T4S7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBR4Q5T4S7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UBR4Q5T4S7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
UBR4Q5T4S7 AC010525.1-201ENST00000585559 441 ntBASIC12.28□□□□□ -0.44
UBR4Q5T4S7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
UBR4Q5T4S7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UBR4Q5T4S7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC12.28□□□□□ -0.44
UBR4Q5T4S7 BX005040.4-201ENST00000637145 1518 ntBASIC12.27□□□□□ -0.44
UBR4Q5T4S7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UBR4Q5T4S7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms