Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.585e-7■■■■□ 22.8
DDX59Q5T1V6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.36■□□□□ 0.375e-7■■■■□ 22.8
DDX59Q5T1V6 SCARB1-205ENST00000538291 5527 ntTSL 516.59■□□□□ 0.255e-7■■■■□ 22.8
DDX59Q5T1V6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.66■□□□□ 0.15e-7■■■■□ 22.8
DDX59Q5T1V6 SCARB1-207ENST00000541661 476 ntTSL 511.56□□□□□ -0.565e-7■■■■□ 22.8
DDX59Q5T1V6 SCARB1-204ENST00000535005 1845 ntTSL 1 (best)11.35□□□□□ -0.595e-7■■■■□ 22.8
DDX59Q5T1V6 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.48□□□□□ -0.094e-9■■■■□ 22.7
DDX59Q5T1V6 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.48□□□□□ -0.094e-9■■■■□ 22.7
DDX59Q5T1V6 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.284e-9■■■■□ 22.7
DDX59Q5T1V6 SLC38A5-205ENST00000441948 871 ntTSL 513.26□□□□□ -0.294e-9■■■■□ 22.7
DDX59Q5T1V6 SLC38A5-209ENST00000497336 493 ntTSL 513.26□□□□□ -0.294e-9■■■■□ 22.7
DDX59Q5T1V6 SLC38A5-203ENST00000429543 656 ntTSL 513.07□□□□□ -0.324e-9■■■■□ 22.7
DDX59Q5T1V6 SLC38A5-207ENST00000488083 622 ntTSL 312.96□□□□□ -0.334e-9■■■■□ 22.7
DDX59Q5T1V6 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.354e-9■■■■□ 22.7
DDX59Q5T1V6 SLC38A5-204ENST00000440085 910 ntTSL 312.31□□□□□ -0.444e-9■■■■□ 22.7
DDX59Q5T1V6 SLC38A5-202ENST00000416711 708 ntTSL 511.99□□□□□ -0.494e-9■■■■□ 22.7
DDX59Q5T1V6 SLC38A5-201ENST00000413668 741 ntTSL 211.27□□□□□ -0.614e-9■■■■□ 22.7
DDX59Q5T1V6 SLC38A5-208ENST00000494034 525 ntTSL 59.52□□□□□ -0.894e-9■■■■□ 22.7
DDX59Q5T1V6 TOP3B-205ENST00000434517 736 ntTSL 519.63■□□□□ 0.737e-7■■■■□ 22.7
DDX59Q5T1V6 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.077e-7■■■■□ 22.7
DDX59Q5T1V6 TOP3B-211ENST00000449704 543 ntTSL 314.28□□□□□ -0.127e-7■■■■□ 22.7
DDX59Q5T1V6 TOP3B-213ENST00000457179 3061 ntTSL 513.43□□□□□ -0.267e-7■■■■□ 22.7
DDX59Q5T1V6 TOP3B-204ENST00000430142 582 ntTSL 213.33□□□□□ -0.287e-7■■■■□ 22.7
DDX59Q5T1V6 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.387e-7■■■■□ 22.7
DDX59Q5T1V6 TOP3B-207ENST00000437103 571 ntTSL 411.09□□□□□ -0.637e-7■■■■□ 22.7
DDX59Q5T1V6 TOP3B-210ENST00000444502 4163 ntTSL 210.23□□□□□ -0.777e-7■■■■□ 22.7
DDX59Q5T1V6 TOP3B-203ENST00000424393 824 ntTSL 59.93□□□□□ -0.827e-7■■■■□ 22.7
DDX59Q5T1V6 TOP3B-212ENST00000456075 561 ntTSL 49.37□□□□□ -0.917e-7■■■■□ 22.7
DDX59Q5T1V6 TOP3B-208ENST00000437929 550 ntTSL 45.96□□□□□ -1.467e-7■■■■□ 22.7
DDX59Q5T1V6 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.842e-8■■■■□ 22.6
DDX59Q5T1V6 TRAPPC12-209ENST00000441099 698 ntTSL 314.44□□□□□ -0.12e-6■■■■□ 22.6
DDX59Q5T1V6 TRAPPC12-206ENST00000417243 1047 ntTSL 511.62□□□□□ -0.552e-6■■■■□ 22.6
DDX59Q5T1V6 TRAPPC12-215ENST00000469147 1002 ntTSL 38.77□□□□□ -1.012e-6■■■■□ 22.6
DDX59Q5T1V6 MAEA-217ENST00000512842 550 ntTSL 413.01□□□□□ -0.331e-8■■■■□ 22.6
DDX59Q5T1V6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.419e-7■■■■□ 22.6
DDX59Q5T1V6 MAGED1-207ENST00000482188 680 ntTSL 38.68□□□□□ -1.021e-6■■■■□ 22.6
DDX59Q5T1V6 EDA-202ENST00000374548 1116 ntTSL 1 (best)23.12■■□□□ 1.296e-7■■■■□ 22.6
DDX59Q5T1V6 EDA-212ENST00000533317 1462 ntTSL 1 (best)21.81■■□□□ 1.086e-7■■■■□ 22.6
DDX59Q5T1V6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.96■□□□□ 0.636e-7■■■■□ 22.6
DDX59Q5T1V6 EDA-205ENST00000502251 1167 ntTSL 1 (best)18.96■□□□□ 0.636e-7■■■■□ 22.6
DDX59Q5T1V6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.96■□□□□ 0.636e-7■■■■□ 22.6
DDX59Q5T1V6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.426e-7■■■■□ 22.6
DDX59Q5T1V6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.386e-7■■■■□ 22.6
DDX59Q5T1V6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.366e-7■■■■□ 22.6
DDX59Q5T1V6 EDA-206ENST00000503592 557 ntTSL 56.55□□□□□ -1.366e-7■■■■□ 22.6
DDX59Q5T1V6 EDA-207ENST00000510681 536 ntTSL 43.71□□□□□ -1.826e-7■■■■□ 22.6
DDX59Q5T1V6 EDA-211ENST00000530321 339 ntTSL 22.87□□□□□ -1.956e-7■■■■□ 22.6
DDX59Q5T1V6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.722e-6■■■■□ 22.6
DDX59Q5T1V6 NOC4L-203ENST00000538784 862 ntTSL 218.44■□□□□ 0.542e-6■■■■□ 22.6
DDX59Q5T1V6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.16■□□□□ 0.342e-6■■■■□ 22.6
DDX59Q5T1V6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.182e-6■■■■□ 22.6
DDX59Q5T1V6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.152e-6■■■■□ 22.6
DDX59Q5T1V6 NOC4L-202ENST00000535343 669 ntTSL 314.65□□□□□ -0.062e-6■■■■□ 22.6
DDX59Q5T1V6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.14■□□□□ 0.019e-7■■■■□ 22.5
DDX59Q5T1V6 ZBTB44-205ENST00000525842 9315 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.649e-7■■■■□ 22.4
DDX59Q5T1V6 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.29□□□□□ -1.723e-6■■■■□ 22.4
DDX59Q5T1V6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.65■■□□□ 1.224e-9■■■■□ 22.2
DDX59Q5T1V6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.034e-9■■■■□ 22.2
DDX59Q5T1V6 CRACR2B-214ENST00000534606 627 ntTSL 320.62■□□□□ 0.894e-9■■■■□ 22.2
DDX59Q5T1V6 CRACR2B-204ENST00000527089 824 ntTSL 319.12■□□□□ 0.654e-9■■■■□ 22.2
DDX59Q5T1V6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.5■□□□□ 0.554e-9■■■■□ 22.2
DDX59Q5T1V6 CRACR2B-209ENST00000530183 530 ntTSL 516.82■□□□□ 0.284e-9■■■■□ 22.2
DDX59Q5T1V6 CRACR2B-206ENST00000528315 575 ntTSL 316.82■□□□□ 0.284e-9■■■■□ 22.2
DDX59Q5T1V6 CRACR2B-211ENST00000530737 834 ntTSL 315.93■□□□□ 0.144e-9■■■■□ 22.2
DDX59Q5T1V6 CRACR2B-212ENST00000533803 742 ntTSL 214.86□□□□□ -0.034e-9■■■■□ 22.2
DDX59Q5T1V6 CRACR2B-213ENST00000534191 1154 ntTSL 214.37□□□□□ -0.114e-9■■■■□ 22.2
DDX59Q5T1V6 D2HGDH-211ENST00000467427 555 ntTSL 317.86■□□□□ 0.452e-8■■■■□ 22.2
DDX59Q5T1V6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.017e-9■■■■□ 22.2
DDX59Q5T1V6 ASF1B-203ENST00000589468 587 ntTSL 318.08■□□□□ 0.487e-9■■■■□ 22.2
DDX59Q5T1V6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.77■□□□□ 0.287e-9■■■■□ 22.2
DDX59Q5T1V6 ASF1B-204ENST00000590835 746 ntTSL 514.63□□□□□ -0.077e-9■■■■□ 22.2
DDX59Q5T1V6 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.24□□□□□ -0.297e-9■■■■□ 22.2
DDX59Q5T1V6 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.381e-6■■■■□ 22.2
DDX59Q5T1V6 MAD1L1-212ENST00000450235 850 ntTSL 315.12■□□□□ 0.017e-7■■■■□ 22.2
DDX59Q5T1V6 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.316e-6■■■■□ 22.2
DDX59Q5T1V6 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.051e-6■■■■□ 22.2
DDX59Q5T1V6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.342e-8■■■■□ 22.1
DDX59Q5T1V6 ZNF710-204ENST00000559419 332 ntTSL 314.73□□□□□ -0.052e-8■■■■□ 22.1
DDX59Q5T1V6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.11■□□□□ 0.974e-10■■■■□ 22.1
DDX59Q5T1V6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.12■□□□□ 0.814e-10■■■■□ 22.1
DDX59Q5T1V6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.19■□□□□ 0.54e-10■■■■□ 22.1
DDX59Q5T1V6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.85□□□□□ -0.194e-10■■■■□ 22.1
DDX59Q5T1V6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.053e-8■■■■□ 22.1
DDX59Q5T1V6 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.183e-8■■■■□ 22.1
DDX59Q5T1V6 EML4-202ENST00000401738 3797 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.813e-8■■■■□ 22.1
DDX59Q5T1V6 MEMO1-205ENST00000413686 769 ntTSL 314.25□□□□□ -0.137e-10■■■■□ 22
DDX59Q5T1V6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.156e-7■■■■□ 22
DDX59Q5T1V6 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.216e-7■■■■□ 22
DDX59Q5T1V6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.87□□□□□ -0.357e-10■■■■□ 22
DDX59Q5T1V6 MEMO1-209ENST00000490459 1242 ntTSL 212.69□□□□□ -0.387e-10■■■■□ 22
DDX59Q5T1V6 MEMO1-201ENST00000295065 4505 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.547e-10■■■■□ 22
DDX59Q5T1V6 MEMO1-207ENST00000426310 1336 ntTSL 2 BASIC10.4□□□□□ -0.747e-10■■■■□ 22
DDX59Q5T1V6 SHC2-204ENST00000590113 632 ntTSL 59.54□□□□□ -0.887e-10■■■■□ 22
DDX59Q5T1V6 POMK-202ENST00000518991 564 ntTSL 47.78□□□□□ -1.166e-7■■■■□ 22
DDX59Q5T1V6 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.217e-10■■■■□ 22
DDX59Q5T1V6 DPY30-206ENST00000446765 1519 ntTSL 53.52□□□□□ -1.857e-10■■■■□ 22
DDX59Q5T1V6 KMT5C-202ENST00000402499 888 ntTSL 220.65■□□□□ 0.92e-6■■■■□ 22
DDX59Q5T1V6 KMT5C-208ENST00000498738 713 ntTSL 519.64■□□□□ 0.732e-6■■■■□ 22
DDX59Q5T1V6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.622e-6■■■■□ 22
DDX59Q5T1V6 KMT5C-210ENST00000589338 1601 ntTSL 1 (best)17.58■□□□□ 0.42e-6■■■■□ 22
Retrieved 100 of 7,289 protein–RNA pairs in 74.8 ms