Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRK2Q5S007 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRK2Q5S007 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRK2Q5S007 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LRRK2Q5S007 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRK2Q5S007 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LRRK2Q5S007 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.4■□□□□ 0.7
LRRK2Q5S007 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRK2Q5S007 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRK2Q5S007 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRK2Q5S007 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRK2Q5S007 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRK2Q5S007 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.4■□□□□ 0.7
LRRK2Q5S007 RARRES2P4-201ENST00000514074 484 ntBASIC19.4■□□□□ 0.7
LRRK2Q5S007 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRK2Q5S007 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRK2Q5S007 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.4■□□□□ 0.7
LRRK2Q5S007 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.4■□□□□ 0.7
LRRK2Q5S007 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRRK2Q5S007 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRK2Q5S007 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
LRRK2Q5S007 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LRRK2Q5S007 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.39■□□□□ 0.69
LRRK2Q5S007 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRK2Q5S007 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.39■□□□□ 0.69
LRRK2Q5S007 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRK2Q5S007 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRK2Q5S007 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRK2Q5S007 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRK2Q5S007 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRK2Q5S007 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRK2Q5S007 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRK2Q5S007 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.38■□□□□ 0.69
LRRK2Q5S007 AC079140.4-201ENST00000507448 529 ntBASIC19.38■□□□□ 0.69
LRRK2Q5S007 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.38■□□□□ 0.69
LRRK2Q5S007 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LRRK2Q5S007 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRK2Q5S007 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRK2Q5S007 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRK2Q5S007 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRK2Q5S007 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.38■□□□□ 0.69
LRRK2Q5S007 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
LRRK2Q5S007 AC104187.1-201ENST00000607510 612 ntBASIC19.38■□□□□ 0.69
LRRK2Q5S007 MYCNOS-205ENST00000641950 531 ntBASIC19.38■□□□□ 0.69
LRRK2Q5S007 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRK2Q5S007 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
LRRK2Q5S007 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRK2Q5S007 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.37■□□□□ 0.69
LRRK2Q5S007 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.37■□□□□ 0.69
LRRK2Q5S007 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
LRRK2Q5S007 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRK2Q5S007 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRK2Q5S007 AC073912.3-201ENST00000624414 853 ntBASIC19.37■□□□□ 0.69
LRRK2Q5S007 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRK2Q5S007 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.37■□□□□ 0.69
LRRK2Q5S007 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
LRRK2Q5S007 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.37■□□□□ 0.69
LRRK2Q5S007 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRK2Q5S007 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.36■□□□□ 0.69
LRRK2Q5S007 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LRRK2Q5S007 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRK2Q5S007 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRK2Q5S007 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
LRRK2Q5S007 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.36■□□□□ 0.69
LRRK2Q5S007 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRK2Q5S007 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRK2Q5S007 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRK2Q5S007 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LRRK2Q5S007 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.36■□□□□ 0.69
LRRK2Q5S007 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRK2Q5S007 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRK2Q5S007 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.35■□□□□ 0.69
LRRK2Q5S007 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRK2Q5S007 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.35■□□□□ 0.69
LRRK2Q5S007 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRK2Q5S007 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRK2Q5S007 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRK2Q5S007 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.35■□□□□ 0.69
LRRK2Q5S007 AC142381.4-202ENST00000563973 229 ntBASIC19.35■□□□□ 0.69
LRRK2Q5S007 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRK2Q5S007 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRK2Q5S007 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.35■□□□□ 0.69
LRRK2Q5S007 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRK2Q5S007 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.35■□□□□ 0.69
LRRK2Q5S007 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRK2Q5S007 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.34■□□□□ 0.69
LRRK2Q5S007 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRK2Q5S007 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
LRRK2Q5S007 MIR6089-201ENST00000616698 64 ntBASIC19.34■□□□□ 0.69
LRRK2Q5S007 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRK2Q5S007 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRRK2Q5S007 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.34■□□□□ 0.69
LRRK2Q5S007 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRRK2Q5S007 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.34■□□□□ 0.69
LRRK2Q5S007 AC010331.1-201ENST00000611423 582 ntBASIC19.34■□□□□ 0.69
LRRK2Q5S007 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRK2Q5S007 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRRK2Q5S007 MKRN4P-201ENST00000444706 1521 ntBASIC19.34■□□□□ 0.69
LRRK2Q5S007 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRK2Q5S007 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms