Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CCSMST1Q4G0I0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCSMST1Q4G0I0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
CCSMST1Q4G0I0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCSMST1Q4G0I0 AC087742.1-201ENST00000575880 1738 ntBASIC21.41■■□□□ 1.02
CCSMST1Q4G0I0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCSMST1Q4G0I0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCSMST1Q4G0I0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCSMST1Q4G0I0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCSMST1Q4G0I0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CCSMST1Q4G0I0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CCSMST1Q4G0I0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CCSMST1Q4G0I0 SLC47A1P1-202ENST00000449666 945 ntBASIC21.4■■□□□ 1.02
CCSMST1Q4G0I0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.4■■□□□ 1.02
CCSMST1Q4G0I0 AL139246.5-201ENST00000606645 996 ntBASIC21.4■■□□□ 1.02
CCSMST1Q4G0I0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCSMST1Q4G0I0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.4■■□□□ 1.02
CCSMST1Q4G0I0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCSMST1Q4G0I0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCSMST1Q4G0I0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCSMST1Q4G0I0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCSMST1Q4G0I0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCSMST1Q4G0I0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CCSMST1Q4G0I0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CCSMST1Q4G0I0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
CCSMST1Q4G0I0 LINC01960-201ENST00000563759 1884 ntBASIC21.39■■□□□ 1.02
CCSMST1Q4G0I0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCSMST1Q4G0I0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CCSMST1Q4G0I0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.39■■□□□ 1.01
CCSMST1Q4G0I0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.39■■□□□ 1.01
CCSMST1Q4G0I0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCSMST1Q4G0I0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCSMST1Q4G0I0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCSMST1Q4G0I0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCSMST1Q4G0I0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.38■■□□□ 1.01
CCSMST1Q4G0I0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CCSMST1Q4G0I0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCSMST1Q4G0I0 OR2I1P-207ENST00000453522 948 ntBASIC21.38■■□□□ 1.01
CCSMST1Q4G0I0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.38■■□□□ 1.01
CCSMST1Q4G0I0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCSMST1Q4G0I0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCSMST1Q4G0I0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCSMST1Q4G0I0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCSMST1Q4G0I0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCSMST1Q4G0I0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.38■■□□□ 1.01
CCSMST1Q4G0I0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCSMST1Q4G0I0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.37■■□□□ 1.01
CCSMST1Q4G0I0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.37■■□□□ 1.01
CCSMST1Q4G0I0 AL031432.3-201ENST00000607698 485 ntBASIC21.37■■□□□ 1.01
CCSMST1Q4G0I0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.37■■□□□ 1.01
CCSMST1Q4G0I0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.37■■□□□ 1.01
CCSMST1Q4G0I0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.37■■□□□ 1.01
CCSMST1Q4G0I0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCSMST1Q4G0I0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCSMST1Q4G0I0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCSMST1Q4G0I0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCSMST1Q4G0I0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.37■■□□□ 1.01
CCSMST1Q4G0I0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCSMST1Q4G0I0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.36■■□□□ 1.01
CCSMST1Q4G0I0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCSMST1Q4G0I0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CCSMST1Q4G0I0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCSMST1Q4G0I0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.36■■□□□ 1.01
CCSMST1Q4G0I0 AC012676.1-201ENST00000574705 1949 ntBASIC21.36■■□□□ 1.01
CCSMST1Q4G0I0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCSMST1Q4G0I0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCSMST1Q4G0I0 AC233723.2-201ENST00000623798 2106 ntBASIC21.36■■□□□ 1.01
CCSMST1Q4G0I0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCSMST1Q4G0I0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCSMST1Q4G0I0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.36■■□□□ 1.01
CCSMST1Q4G0I0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCSMST1Q4G0I0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.35■■□□□ 1.01
CCSMST1Q4G0I0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.35■■□□□ 1.01
CCSMST1Q4G0I0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCSMST1Q4G0I0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCSMST1Q4G0I0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCSMST1Q4G0I0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CCSMST1Q4G0I0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
CCSMST1Q4G0I0 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.35■■□□□ 1.01
CCSMST1Q4G0I0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.35■■□□□ 1.01
CCSMST1Q4G0I0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCSMST1Q4G0I0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CCSMST1Q4G0I0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CCSMST1Q4G0I0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCSMST1Q4G0I0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CCSMST1Q4G0I0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCSMST1Q4G0I0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCSMST1Q4G0I0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCSMST1Q4G0I0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCSMST1Q4G0I0 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.34■■□□□ 1.01
CCSMST1Q4G0I0 AL031602.1-201ENST00000633169 911 ntBASIC21.34■■□□□ 1.01
CCSMST1Q4G0I0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCSMST1Q4G0I0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCSMST1Q4G0I0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CCSMST1Q4G0I0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCSMST1Q4G0I0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCSMST1Q4G0I0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.33■■□□□ 1.01
CCSMST1Q4G0I0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCSMST1Q4G0I0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CCSMST1Q4G0I0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms