Protein–RNA interactions for Protein: Q3ZCM7

TUBB8, Tubulin beta-8 chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB8Q3ZCM7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 AC103834.1-201ENST00000520383 144 ntBASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 MIR4508-201ENST00000584178 70 ntBASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 AL035685.1-201ENST00000636663 812 ntBASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TUBB8Q3ZCM7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TUBB8Q3ZCM7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TUBB8Q3ZCM7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TUBB8Q3ZCM7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TUBB8Q3ZCM7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TUBB8Q3ZCM7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TUBB8Q3ZCM7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TUBB8Q3ZCM7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TUBB8Q3ZCM7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TUBB8Q3ZCM7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TUBB8Q3ZCM7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.54■■□□□ 1.2
TUBB8Q3ZCM7 AC079630.1-202ENST00000618127 1840 ntBASIC22.54■■□□□ 1.2
TUBB8Q3ZCM7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TUBB8Q3ZCM7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TUBB8Q3ZCM7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TUBB8Q3ZCM7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TUBB8Q3ZCM7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.54■■□□□ 1.2
TUBB8Q3ZCM7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TUBB8Q3ZCM7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TUBB8Q3ZCM7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TUBB8Q3ZCM7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
TUBB8Q3ZCM7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TUBB8Q3ZCM7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TUBB8Q3ZCM7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.53■■□□□ 1.2
TUBB8Q3ZCM7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.53■■□□□ 1.2
TUBB8Q3ZCM7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.53■■□□□ 1.2
TUBB8Q3ZCM7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TUBB8Q3ZCM7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.53■■□□□ 1.2
TUBB8Q3ZCM7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
TUBB8Q3ZCM7 FAM99A-202ENST00000538190 1989 ntBASIC22.52■■□□□ 1.2
TUBB8Q3ZCM7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TUBB8Q3ZCM7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
TUBB8Q3ZCM7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TUBB8Q3ZCM7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TUBB8Q3ZCM7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.52■■□□□ 1.2
TUBB8Q3ZCM7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TUBB8Q3ZCM7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TUBB8Q3ZCM7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
TUBB8Q3ZCM7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TUBB8Q3ZCM7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
TUBB8Q3ZCM7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
TUBB8Q3ZCM7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
TUBB8Q3ZCM7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TUBB8Q3ZCM7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.51■■□□□ 1.19
TUBB8Q3ZCM7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.51■■□□□ 1.19
TUBB8Q3ZCM7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TUBB8Q3ZCM7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TUBB8Q3ZCM7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
TUBB8Q3ZCM7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TUBB8Q3ZCM7 AC019171.1-201ENST00000601251 1056 ntBASIC22.51■■□□□ 1.19
TUBB8Q3ZCM7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.51■■□□□ 1.19
TUBB8Q3ZCM7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.51■■□□□ 1.19
TUBB8Q3ZCM7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TUBB8Q3ZCM7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
TUBB8Q3ZCM7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TUBB8Q3ZCM7 LINC01521-201ENST00000504184 1943 ntBASIC22.51■■□□□ 1.19
TUBB8Q3ZCM7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TUBB8Q3ZCM7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TUBB8Q3ZCM7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
TUBB8Q3ZCM7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TUBB8Q3ZCM7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
TUBB8Q3ZCM7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TUBB8Q3ZCM7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TUBB8Q3ZCM7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.5■■□□□ 1.19
TUBB8Q3ZCM7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.5■■□□□ 1.19
TUBB8Q3ZCM7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TUBB8Q3ZCM7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
TUBB8Q3ZCM7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
TUBB8Q3ZCM7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.49■■□□□ 1.19
TUBB8Q3ZCM7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TUBB8Q3ZCM7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TUBB8Q3ZCM7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TUBB8Q3ZCM7 AC080038.3-201ENST00000623346 1952 ntBASIC22.49■■□□□ 1.19
TUBB8Q3ZCM7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.49■■□□□ 1.19
TUBB8Q3ZCM7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
TUBB8Q3ZCM7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.49■■□□□ 1.19
TUBB8Q3ZCM7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.49■■□□□ 1.19
TUBB8Q3ZCM7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TUBB8Q3ZCM7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
TUBB8Q3ZCM7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TUBB8Q3ZCM7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms