Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PUDPQ08623 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PUDPQ08623 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.92■□□□□ 0.78
PUDPQ08623 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PUDPQ08623 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PUDPQ08623 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.91■□□□□ 0.78
PUDPQ08623 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PUDPQ08623 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.91■□□□□ 0.78
PUDPQ08623 LINC00565-201ENST00000562710 2331 ntBASIC19.91■□□□□ 0.78
PUDPQ08623 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PUDPQ08623 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PUDPQ08623 AL356441.2-201ENST00000443009 864 ntBASIC19.91■□□□□ 0.78
PUDPQ08623 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.91■□□□□ 0.78
PUDPQ08623 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
PUDPQ08623 MIR3621-201ENST00000580529 85 ntBASIC19.91■□□□□ 0.78
PUDPQ08623 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.91■□□□□ 0.78
PUDPQ08623 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
PUDPQ08623 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PUDPQ08623 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PUDPQ08623 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PUDPQ08623 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PUDPQ08623 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PUDPQ08623 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.9■□□□□ 0.78
PUDPQ08623 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.9■□□□□ 0.78
PUDPQ08623 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PUDPQ08623 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PUDPQ08623 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.9■□□□□ 0.78
PUDPQ08623 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PUDPQ08623 AC009086.3-201ENST00000623486 1008 ntBASIC19.9■□□□□ 0.78
PUDPQ08623 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PUDPQ08623 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PUDPQ08623 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PUDPQ08623 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PUDPQ08623 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PUDPQ08623 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.9■□□□□ 0.78
PUDPQ08623 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PUDPQ08623 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PUDPQ08623 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
PUDPQ08623 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.89■□□□□ 0.78
PUDPQ08623 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
PUDPQ08623 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PUDPQ08623 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.89■□□□□ 0.77
PUDPQ08623 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.89■□□□□ 0.77
PUDPQ08623 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.89■□□□□ 0.77
PUDPQ08623 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PUDPQ08623 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PUDPQ08623 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PUDPQ08623 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.89■□□□□ 0.77
PUDPQ08623 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.89■□□□□ 0.77
PUDPQ08623 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PUDPQ08623 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
PUDPQ08623 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.88■□□□□ 0.77
PUDPQ08623 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PUDPQ08623 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PUDPQ08623 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.88■□□□□ 0.77
PUDPQ08623 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.88■□□□□ 0.77
PUDPQ08623 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PUDPQ08623 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PUDPQ08623 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PUDPQ08623 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PUDPQ08623 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
PUDPQ08623 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.87■□□□□ 0.77
PUDPQ08623 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PUDPQ08623 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PUDPQ08623 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PUDPQ08623 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PUDPQ08623 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PUDPQ08623 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PUDPQ08623 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PUDPQ08623 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PUDPQ08623 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.87■□□□□ 0.77
PUDPQ08623 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PUDPQ08623 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PUDPQ08623 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PUDPQ08623 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.87■□□□□ 0.77
PUDPQ08623 AC233723.2-201ENST00000623798 2106 ntBASIC19.87■□□□□ 0.77
PUDPQ08623 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PUDPQ08623 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PUDPQ08623 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.86■□□□□ 0.77
PUDPQ08623 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PUDPQ08623 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PUDPQ08623 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PUDPQ08623 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.86■□□□□ 0.77
PUDPQ08623 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PUDPQ08623 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PUDPQ08623 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PUDPQ08623 AC241377.3-202ENST00000626088 1088 ntBASIC19.86■□□□□ 0.77
PUDPQ08623 AC241585.3-202ENST00000628937 1088 ntBASIC19.86■□□□□ 0.77
PUDPQ08623 AC245100.8-202ENST00000629247 1058 ntBASIC19.86■□□□□ 0.77
PUDPQ08623 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.86■□□□□ 0.77
PUDPQ08623 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PUDPQ08623 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PUDPQ08623 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PUDPQ08623 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PUDPQ08623 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PUDPQ08623 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PUDPQ08623 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PUDPQ08623 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PUDPQ08623 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PUDPQ08623 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms