Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RAB38P57729 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB38P57729 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB38P57729 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB38P57729 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RAB38P57729 AC008764.7-201ENST00000593779 1081 ntBASIC20.71■□□□□ 0.91
RAB38P57729 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB38P57729 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB38P57729 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
RAB38P57729 LINC01960-201ENST00000563759 1884 ntBASIC20.71■□□□□ 0.91
RAB38P57729 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
RAB38P57729 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB38P57729 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.7■□□□□ 0.9
RAB38P57729 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB38P57729 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB38P57729 MIR939-201ENST00000401314 82 ntBASIC20.7■□□□□ 0.9
RAB38P57729 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB38P57729 SUDS3P1-201ENST00000505831 966 ntBASIC20.7■□□□□ 0.9
RAB38P57729 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.7■□□□□ 0.9
RAB38P57729 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB38P57729 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB38P57729 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB38P57729 AC068587.7-201ENST00000641602 218 ntBASIC20.7■□□□□ 0.9
RAB38P57729 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB38P57729 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB38P57729 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RAB38P57729 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB38P57729 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB38P57729 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB38P57729 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB38P57729 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB38P57729 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB38P57729 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RAB38P57729 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB38P57729 AC099791.1-201ENST00000416440 715 ntBASIC20.69■□□□□ 0.9
RAB38P57729 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB38P57729 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB38P57729 AC142381.2-201ENST00000566120 298 ntBASIC20.69■□□□□ 0.9
RAB38P57729 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB38P57729 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.69■□□□□ 0.9
RAB38P57729 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB38P57729 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB38P57729 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
RAB38P57729 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB38P57729 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB38P57729 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB38P57729 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB38P57729 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB38P57729 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RAB38P57729 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB38P57729 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB38P57729 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RAB38P57729 AC091305.1-201ENST00000479476 895 ntBASIC20.68■□□□□ 0.9
RAB38P57729 AP005435.1-201ENST00000529293 1178 ntBASIC20.68■□□□□ 0.9
RAB38P57729 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.68■□□□□ 0.9
RAB38P57729 AL136967.2-201ENST00000623968 743 ntBASIC20.68■□□□□ 0.9
RAB38P57729 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB38P57729 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB38P57729 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.68■□□□□ 0.9
RAB38P57729 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.68■□□□□ 0.9
RAB38P57729 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB38P57729 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
RAB38P57729 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB38P57729 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB38P57729 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RAB38P57729 AC126544.1-201ENST00000580842 1059 ntBASIC20.67■□□□□ 0.9
RAB38P57729 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.67■□□□□ 0.9
RAB38P57729 RASA4CP-201ENST00000424092 1398 ntBASIC20.67■□□□□ 0.9
RAB38P57729 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAB38P57729 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB38P57729 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB38P57729 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB38P57729 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB38P57729 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.66■□□□□ 0.9
RAB38P57729 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.66■□□□□ 0.9
RAB38P57729 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB38P57729 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.66■□□□□ 0.9
RAB38P57729 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.66■□□□□ 0.9
RAB38P57729 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB38P57729 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB38P57729 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.66■□□□□ 0.9
RAB38P57729 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB38P57729 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB38P57729 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RAB38P57729 AC068473.5-201ENST00000616428 2072 ntBASIC20.66■□□□□ 0.9
RAB38P57729 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB38P57729 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RAB38P57729 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RAB38P57729 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB38P57729 CA15P2-201ENST00000611168 834 ntBASIC20.65■□□□□ 0.9
RAB38P57729 AC087239.1-201ENST00000622671 572 ntBASIC20.65■□□□□ 0.9
RAB38P57729 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB38P57729 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB38P57729 C1orf229-201ENST00000623686 2258 ntBASIC20.65■□□□□ 0.9
RAB38P57729 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB38P57729 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB38P57729 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RAB38P57729 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
RAB38P57729 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB38P57729 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms