Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3P56703 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.86■□□□□ 0.93
WNT3P56703 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.86■□□□□ 0.93
WNT3P56703 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.86■□□□□ 0.93
WNT3P56703 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3P56703 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3P56703 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.86■□□□□ 0.93
WNT3P56703 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3P56703 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
WNT3P56703 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
WNT3P56703 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
WNT3P56703 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
WNT3P56703 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.85■□□□□ 0.93
WNT3P56703 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.85■□□□□ 0.93
WNT3P56703 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.85■□□□□ 0.93
WNT3P56703 AC009086.3-201ENST00000623486 1008 ntBASIC20.85■□□□□ 0.93
WNT3P56703 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
WNT3P56703 C11orf96-202ENST00000528572 1834 ntBASIC20.85■□□□□ 0.93
WNT3P56703 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
WNT3P56703 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
WNT3P56703 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.84■□□□□ 0.93
WNT3P56703 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
WNT3P56703 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
WNT3P56703 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
WNT3P56703 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
WNT3P56703 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
WNT3P56703 C17orf82-201ENST00000623772 1530 ntBASIC20.83■□□□□ 0.93
WNT3P56703 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
WNT3P56703 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.83■□□□□ 0.93
WNT3P56703 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.83■□□□□ 0.93
WNT3P56703 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.83■□□□□ 0.93
WNT3P56703 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
WNT3P56703 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
WNT3P56703 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
WNT3P56703 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.83■□□□□ 0.93
WNT3P56703 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
WNT3P56703 LINC01960-201ENST00000563759 1884 ntBASIC20.83■□□□□ 0.92
WNT3P56703 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
WNT3P56703 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
WNT3P56703 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.83■□□□□ 0.92
WNT3P56703 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
WNT3P56703 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3P56703 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3P56703 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
WNT3P56703 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.82■□□□□ 0.92
WNT3P56703 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3P56703 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.82■□□□□ 0.92
WNT3P56703 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.82■□□□□ 0.92
WNT3P56703 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3P56703 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3P56703 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3P56703 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
WNT3P56703 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
WNT3P56703 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.81■□□□□ 0.92
WNT3P56703 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.81■□□□□ 0.92
WNT3P56703 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
WNT3P56703 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3P56703 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3P56703 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3P56703 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3P56703 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.81■□□□□ 0.92
WNT3P56703 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.81■□□□□ 0.92
WNT3P56703 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.81■□□□□ 0.92
WNT3P56703 AL117332.1-201ENST00000622628 974 ntBASIC20.81■□□□□ 0.92
WNT3P56703 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
WNT3P56703 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3P56703 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
WNT3P56703 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3P56703 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.81■□□□□ 0.92
WNT3P56703 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3P56703 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3P56703 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
WNT3P56703 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
WNT3P56703 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
WNT3P56703 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.81■□□□□ 0.92
WNT3P56703 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
WNT3P56703 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
WNT3P56703 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
WNT3P56703 AC004687.1-201ENST00000579003 1625 ntBASIC20.8■□□□□ 0.92
WNT3P56703 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
WNT3P56703 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.8■□□□□ 0.92
WNT3P56703 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.8■□□□□ 0.92
WNT3P56703 AC131281.2-201ENST00000520478 145 ntBASIC20.8■□□□□ 0.92
WNT3P56703 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
WNT3P56703 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
WNT3P56703 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.8■□□□□ 0.92
WNT3P56703 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.8■□□□□ 0.92
WNT3P56703 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.79■□□□□ 0.92
WNT3P56703 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
WNT3P56703 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3P56703 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3P56703 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
WNT3P56703 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3P56703 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.79■□□□□ 0.92
WNT3P56703 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.79■□□□□ 0.92
WNT3P56703 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.79■□□□□ 0.92
WNT3P56703 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.79■□□□□ 0.92
WNT3P56703 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3P56703 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
WNT3P56703 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms