Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDH11P55287 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CDH11P55287 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH11P55287 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
CDH11P55287 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.06■□□□□ 0.8
CDH11P55287 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH11P55287 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.06■□□□□ 0.8
CDH11P55287 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.06■□□□□ 0.8
CDH11P55287 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.06■□□□□ 0.8
CDH11P55287 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.06■□□□□ 0.8
CDH11P55287 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.06■□□□□ 0.8
CDH11P55287 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CDH11P55287 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.06■□□□□ 0.8
CDH11P55287 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH11P55287 AL353803.4-201ENST00000565882 1934 ntBASIC20.06■□□□□ 0.8
CDH11P55287 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH11P55287 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH11P55287 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH11P55287 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH11P55287 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH11P55287 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
CDH11P55287 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.05■□□□□ 0.8
CDH11P55287 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH11P55287 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH11P55287 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH11P55287 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CDH11P55287 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH11P55287 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH11P55287 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH11P55287 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH11P55287 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH11P55287 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH11P55287 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH11P55287 AL356740.2-201ENST00000601559 647 ntBASIC20.04■□□□□ 0.8
CDH11P55287 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDH11P55287 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH11P55287 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH11P55287 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH11P55287 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.04■□□□□ 0.8
CDH11P55287 AC092053.2-201ENST00000640557 1818 ntBASIC20.04■□□□□ 0.8
CDH11P55287 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH11P55287 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH11P55287 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH11P55287 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH11P55287 AC139530.1-201ENST00000575312 1977 ntBASIC20.03■□□□□ 0.8
CDH11P55287 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH11P55287 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH11P55287 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CDH11P55287 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.03■□□□□ 0.8
CDH11P55287 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.03■□□□□ 0.8
CDH11P55287 AC131281.2-201ENST00000520478 145 ntBASIC20.03■□□□□ 0.8
CDH11P55287 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.03■□□□□ 0.8
CDH11P55287 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.03■□□□□ 0.8
CDH11P55287 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH11P55287 AC019069.1-201ENST00000610008 1333 ntBASIC20.02■□□□□ 0.8
CDH11P55287 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.02■□□□□ 0.8
CDH11P55287 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDH11P55287 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH11P55287 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH11P55287 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDH11P55287 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.02■□□□□ 0.8
CDH11P55287 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.02■□□□□ 0.8
CDH11P55287 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.02■□□□□ 0.8
CDH11P55287 MIR3621-201ENST00000580529 85 ntBASIC20.02■□□□□ 0.8
CDH11P55287 SNX5-217ENST00000606557 1087 ntBASIC20.02■□□□□ 0.8
CDH11P55287 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CDH11P55287 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH11P55287 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH11P55287 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH11P55287 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.01■□□□□ 0.79
CDH11P55287 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.01■□□□□ 0.79
CDH11P55287 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.01■□□□□ 0.79
CDH11P55287 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CDH11P55287 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH11P55287 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH11P55287 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH11P55287 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CDH11P55287 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.01■□□□□ 0.79
CDH11P55287 C11orf96-202ENST00000528572 1834 ntBASIC20.01■□□□□ 0.79
CDH11P55287 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH11P55287 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH11P55287 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH11P55287 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH11P55287 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
CDH11P55287 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CDH11P55287 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH11P55287 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH11P55287 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH11P55287 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDH11P55287 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH11P55287 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDH11P55287 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CDH11P55287 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20■□□□□ 0.79
CDH11P55287 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH11P55287 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CDH11P55287 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH11P55287 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH11P55287 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH11P55287 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.99■□□□□ 0.79
CDH11P55287 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms