Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NR1H2P55055 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NR1H2P55055 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NR1H2P55055 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NR1H2P55055 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NR1H2P55055 KRT18P24-201ENST00000344739 1156 ntBASIC20.71■□□□□ 0.91
NR1H2P55055 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NR1H2P55055 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NR1H2P55055 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
NR1H2P55055 BX664725.1-201ENST00000438252 379 ntBASIC20.71■□□□□ 0.91
NR1H2P55055 THA1P-201ENST00000590384 1145 ntBASIC20.71■□□□□ 0.91
NR1H2P55055 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NR1H2P55055 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NR1H2P55055 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NR1H2P55055 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NR1H2P55055 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.71■□□□□ 0.91
NR1H2P55055 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
NR1H2P55055 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NR1H2P55055 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NR1H2P55055 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
NR1H2P55055 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.7■□□□□ 0.9
NR1H2P55055 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NR1H2P55055 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NR1H2P55055 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NR1H2P55055 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NR1H2P55055 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.9
NR1H2P55055 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NR1H2P55055 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NR1H2P55055 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NR1H2P55055 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.7■□□□□ 0.9
NR1H2P55055 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H2P55055 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.69■□□□□ 0.9
NR1H2P55055 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H2P55055 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H2P55055 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H2P55055 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H2P55055 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H2P55055 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NR1H2P55055 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NR1H2P55055 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H2P55055 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.69■□□□□ 0.9
NR1H2P55055 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H2P55055 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H2P55055 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.69■□□□□ 0.9
NR1H2P55055 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H2P55055 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H2P55055 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H2P55055 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NR1H2P55055 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.69■□□□□ 0.9
NR1H2P55055 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NR1H2P55055 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NR1H2P55055 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
NR1H2P55055 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NR1H2P55055 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NR1H2P55055 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
NR1H2P55055 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NR1H2P55055 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NR1H2P55055 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NR1H2P55055 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NR1H2P55055 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NR1H2P55055 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NR1H2P55055 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NR1H2P55055 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NR1H2P55055 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.67■□□□□ 0.9
NR1H2P55055 AL356441.2-201ENST00000443009 864 ntBASIC20.67■□□□□ 0.9
NR1H2P55055 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
NR1H2P55055 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.67■□□□□ 0.9
NR1H2P55055 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NR1H2P55055 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NR1H2P55055 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NR1H2P55055 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.66■□□□□ 0.9
NR1H2P55055 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NR1H2P55055 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NR1H2P55055 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NR1H2P55055 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NR1H2P55055 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.66■□□□□ 0.9
NR1H2P55055 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.66■□□□□ 0.9
NR1H2P55055 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.66■□□□□ 0.9
NR1H2P55055 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NR1H2P55055 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.66■□□□□ 0.9
NR1H2P55055 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NR1H2P55055 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NR1H2P55055 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NR1H2P55055 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NR1H2P55055 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.65■□□□□ 0.9
NR1H2P55055 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NR1H2P55055 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NR1H2P55055 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.65■□□□□ 0.9
NR1H2P55055 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NR1H2P55055 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.65■□□□□ 0.9
NR1H2P55055 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NR1H2P55055 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.65■□□□□ 0.9
NR1H2P55055 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NR1H2P55055 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
NR1H2P55055 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NR1H2P55055 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
NR1H2P55055 AC019069.1-201ENST00000610008 1333 ntBASIC20.64■□□□□ 0.89
NR1H2P55055 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.64■□□□□ 0.89
NR1H2P55055 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.64■□□□□ 0.89
NR1H2P55055 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms