Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 GXYLT1P2-201ENST00000433312 1230 ntBASIC31.94■■■□□ 2.7
CLTCL1P53675 RAP2CP1-201ENST00000605103 478 ntBASIC31.94■■■□□ 2.7
CLTCL1P53675 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
CLTCL1P53675 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CLTCL1P53675 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
CLTCL1P53675 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CLTCL1P53675 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
CLTCL1P53675 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC31.93■■■□□ 2.7
CLTCL1P53675 SMUG1P1-201ENST00000590640 811 ntBASIC31.93■■■□□ 2.7
CLTCL1P53675 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC31.93■■■□□ 2.7
CLTCL1P53675 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CLTCL1P53675 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC31.93■■■□□ 2.7
CLTCL1P53675 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CLTCL1P53675 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CLTCL1P53675 AL353803.4-201ENST00000565882 1934 ntBASIC31.93■■■□□ 2.7
CLTCL1P53675 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CLTCL1P53675 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
CLTCL1P53675 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CLTCL1P53675 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CLTCL1P53675 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CLTCL1P53675 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CLTCL1P53675 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CLTCL1P53675 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CLTCL1P53675 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC31.91■■■□□ 2.7
CLTCL1P53675 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
CLTCL1P53675 AC004854.2-201ENST00000608450 1441 ntBASIC31.91■■■□□ 2.7
CLTCL1P53675 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC31.9■■■□□ 2.7
CLTCL1P53675 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
CLTCL1P53675 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CLTCL1P53675 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
CLTCL1P53675 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CLTCL1P53675 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CLTCL1P53675 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
CLTCL1P53675 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC31.89■■■□□ 2.7
CLTCL1P53675 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CLTCL1P53675 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC31.89■■■□□ 2.7
CLTCL1P53675 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC31.89■■■□□ 2.7
CLTCL1P53675 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CLTCL1P53675 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CLTCL1P53675 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC31.89■■■□□ 2.7
CLTCL1P53675 AC068587.7-201ENST00000641602 218 ntBASIC31.89■■■□□ 2.7
CLTCL1P53675 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
CLTCL1P53675 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
CLTCL1P53675 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC31.88■■■□□ 2.69
CLTCL1P53675 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CLTCL1P53675 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
CLTCL1P53675 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC31.88■■■□□ 2.69
CLTCL1P53675 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CLTCL1P53675 DENND3-207ENST00000518347 850 ntTSL 2 BASIC31.88■■■□□ 2.69
CLTCL1P53675 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
CLTCL1P53675 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC31.88■■■□□ 2.69
CLTCL1P53675 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CLTCL1P53675 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CLTCL1P53675 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CLTCL1P53675 AP004607.4-201ENST00000530158 1459 ntBASIC31.87■■■□□ 2.69
CLTCL1P53675 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
CLTCL1P53675 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CLTCL1P53675 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CLTCL1P53675 DBI-210ENST00000542275 757 ntTSL 5 BASIC31.86■■■□□ 2.69
CLTCL1P53675 GALNS-213ENST00000569433 723 ntTSL 3 BASIC31.86■■■□□ 2.69
CLTCL1P53675 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC31.86■■■□□ 2.69
CLTCL1P53675 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC31.86■■■□□ 2.69
CLTCL1P53675 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC31.86■■■□□ 2.69
CLTCL1P53675 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CLTCL1P53675 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CLTCL1P53675 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
CLTCL1P53675 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CLTCL1P53675 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC31.85■■■□□ 2.69
CLTCL1P53675 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CLTCL1P53675 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CLTCL1P53675 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
CLTCL1P53675 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC31.85■■■□□ 2.69
CLTCL1P53675 ID1-201ENST00000376105 1233 ntBASIC31.85■■■□□ 2.69
CLTCL1P53675 AC010141.3-201ENST00000456659 717 ntBASIC31.85■■■□□ 2.69
CLTCL1P53675 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC31.85■■■□□ 2.69
CLTCL1P53675 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC31.85■■■□□ 2.69
CLTCL1P53675 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC31.85■■■□□ 2.69
CLTCL1P53675 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
CLTCL1P53675 BX005040.4-201ENST00000637145 1518 ntBASIC31.84■■■□□ 2.69
CLTCL1P53675 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
CLTCL1P53675 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CLTCL1P53675 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC31.84■■■□□ 2.69
CLTCL1P53675 STX7-201ENST00000367937 1090 ntTSL 5 BASIC31.83■■■□□ 2.69
CLTCL1P53675 AC087239.1-201ENST00000622671 572 ntBASIC31.83■■■□□ 2.69
CLTCL1P53675 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
CLTCL1P53675 AC073111.5-205ENST00000641717 521 ntBASIC31.83■■■□□ 2.69
CLTCL1P53675 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC31.83■■■□□ 2.69
CLTCL1P53675 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC31.83■■■□□ 2.69
CLTCL1P53675 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC31.82■■■□□ 2.68
CLTCL1P53675 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC31.82■■■□□ 2.68
CLTCL1P53675 AC137761.2-201ENST00000561729 223 ntBASIC31.82■■■□□ 2.68
CLTCL1P53675 AC145350.3-201ENST00000569033 163 ntBASIC31.82■■■□□ 2.68
CLTCL1P53675 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC31.82■■■□□ 2.68
CLTCL1P53675 WWOX-218ENST00000627394 894 ntTSL 5 BASIC31.82■■■□□ 2.68
CLTCL1P53675 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CLTCL1P53675 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CLTCL1P53675 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CLTCL1P53675 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC31.81■■■□□ 2.68
CLTCL1P53675 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CLTCL1P53675 COX20-201ENST00000366528 568 ntTSL 2 BASIC31.8■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms