Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCNKAP51800 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCNKAP51800 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLCNKAP51800 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLCNKAP51800 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCNKAP51800 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCNKAP51800 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.57■■□□□ 1.04
CLCNKAP51800 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CLCNKAP51800 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.57■■□□□ 1.04
CLCNKAP51800 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCNKAP51800 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLCNKAP51800 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCNKAP51800 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CLCNKAP51800 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLCNKAP51800 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCNKAP51800 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.56■■□□□ 1.04
CLCNKAP51800 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCNKAP51800 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCNKAP51800 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.56■■□□□ 1.04
CLCNKAP51800 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCNKAP51800 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLCNKAP51800 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLCNKAP51800 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLCNKAP51800 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCNKAP51800 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.56■■□□□ 1.04
CLCNKAP51800 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CLCNKAP51800 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CLCNKAP51800 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CLCNKAP51800 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.55■■□□□ 1.04
CLCNKAP51800 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCNKAP51800 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
CLCNKAP51800 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.55■■□□□ 1.04
CLCNKAP51800 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCNKAP51800 MIR572-201ENST00000384983 95 ntBASIC21.55■■□□□ 1.04
CLCNKAP51800 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLCNKAP51800 AL031602.1-201ENST00000633169 911 ntBASIC21.55■■□□□ 1.04
CLCNKAP51800 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CLCNKAP51800 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLCNKAP51800 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCNKAP51800 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCNKAP51800 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CLCNKAP51800 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.54■■□□□ 1.04
CLCNKAP51800 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCNKAP51800 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCNKAP51800 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.54■■□□□ 1.04
CLCNKAP51800 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCNKAP51800 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CLCNKAP51800 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CLCNKAP51800 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.54■■□□□ 1.04
CLCNKAP51800 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLCNKAP51800 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLCNKAP51800 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLCNKAP51800 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CLCNKAP51800 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.53■■□□□ 1.04
CLCNKAP51800 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLCNKAP51800 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.53■■□□□ 1.04
CLCNKAP51800 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLCNKAP51800 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLCNKAP51800 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLCNKAP51800 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCNKAP51800 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.52■■□□□ 1.04
CLCNKAP51800 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCNKAP51800 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.52■■□□□ 1.04
CLCNKAP51800 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCNKAP51800 AC026271.2-201ENST00000428091 497 ntBASIC21.52■■□□□ 1.04
CLCNKAP51800 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.52■■□□□ 1.04
CLCNKAP51800 RARRES2P6-201ENST00000567333 442 ntBASIC21.52■■□□□ 1.04
CLCNKAP51800 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CLCNKAP51800 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CLCNKAP51800 DUSP8P5-201ENST00000422884 1815 ntBASIC21.52■■□□□ 1.04
CLCNKAP51800 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.52■■□□□ 1.03
CLCNKAP51800 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CLCNKAP51800 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
CLCNKAP51800 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.52■■□□□ 1.03
CLCNKAP51800 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCNKAP51800 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLCNKAP51800 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.51■■□□□ 1.03
CLCNKAP51800 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCNKAP51800 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCNKAP51800 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCNKAP51800 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLCNKAP51800 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.51■■□□□ 1.03
CLCNKAP51800 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CLCNKAP51800 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.51■■□□□ 1.03
CLCNKAP51800 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.51■■□□□ 1.03
CLCNKAP51800 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CLCNKAP51800 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCNKAP51800 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCNKAP51800 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCNKAP51800 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.5■■□□□ 1.03
CLCNKAP51800 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CLCNKAP51800 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLCNKAP51800 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.5■■□□□ 1.03
CLCNKAP51800 AL358852.1-201ENST00000623174 1268 ntBASIC21.5■■□□□ 1.03
CLCNKAP51800 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCNKAP51800 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCNKAP51800 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCNKAP51800 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.5■■□□□ 1.03
CLCNKAP51800 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCNKAP51800 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms