Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN2P51788 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN2P51788 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN2P51788 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN2P51788 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.21■□□□□ 0.99
CLCN2P51788 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN2P51788 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN2P51788 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN2P51788 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLCN2P51788 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.2■□□□□ 0.98
CLCN2P51788 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.2■□□□□ 0.98
CLCN2P51788 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CLCN2P51788 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CLCN2P51788 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.2■□□□□ 0.98
CLCN2P51788 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLCN2P51788 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.2■□□□□ 0.98
CLCN2P51788 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLCN2P51788 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLCN2P51788 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CLCN2P51788 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CLCN2P51788 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CLCN2P51788 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CLCN2P51788 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCN2P51788 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLCN2P51788 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLCN2P51788 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.19■□□□□ 0.98
CLCN2P51788 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.19■□□□□ 0.98
CLCN2P51788 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLCN2P51788 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCN2P51788 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLCN2P51788 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCN2P51788 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLCN2P51788 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCN2P51788 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CLCN2P51788 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN2P51788 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.18■□□□□ 0.98
CLCN2P51788 ALDH1A3-203ENST00000557963 1670 ntBASIC21.18■□□□□ 0.98
CLCN2P51788 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN2P51788 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN2P51788 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN2P51788 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN2P51788 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN2P51788 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN2P51788 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN2P51788 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.18■□□□□ 0.98
CLCN2P51788 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN2P51788 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN2P51788 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN2P51788 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN2P51788 AL136116.3-201ENST00000402907 1138 ntBASIC21.17■□□□□ 0.98
CLCN2P51788 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN2P51788 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN2P51788 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CLCN2P51788 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CLCN2P51788 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN2P51788 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.17■□□□□ 0.98
CLCN2P51788 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN2P51788 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.17■□□□□ 0.98
CLCN2P51788 RNF165-205ENST00000588679 2904 ntBASIC21.16■□□□□ 0.98
CLCN2P51788 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN2P51788 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN2P51788 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN2P51788 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN2P51788 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.16■□□□□ 0.98
CLCN2P51788 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN2P51788 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.16■□□□□ 0.98
CLCN2P51788 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CLCN2P51788 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN2P51788 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.16■□□□□ 0.98
CLCN2P51788 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN2P51788 AL512631.2-201ENST00000604634 923 ntBASIC21.16■□□□□ 0.98
CLCN2P51788 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.16■□□□□ 0.98
CLCN2P51788 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.16■□□□□ 0.98
CLCN2P51788 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN2P51788 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN2P51788 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN2P51788 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CLCN2P51788 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN2P51788 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.15■□□□□ 0.98
CLCN2P51788 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN2P51788 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN2P51788 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN2P51788 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CLCN2P51788 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.15■□□□□ 0.98
CLCN2P51788 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN2P51788 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN2P51788 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLCN2P51788 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLCN2P51788 MIR4466-201ENST00000606121 54 ntBASIC21.14■□□□□ 0.97
CLCN2P51788 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.14■□□□□ 0.97
CLCN2P51788 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCN2P51788 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.14■□□□□ 0.97
CLCN2P51788 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCN2P51788 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLCN2P51788 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.14■□□□□ 0.97
CLCN2P51788 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCN2P51788 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CLCN2P51788 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCN2P51788 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCN2P51788 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms