Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HLCSP50747 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLCSP50747 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLCSP50747 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLCSP50747 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HLCSP50747 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
HLCSP50747 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
HLCSP50747 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.93■□□□□ 0.94
HLCSP50747 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLCSP50747 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLCSP50747 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
HLCSP50747 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
HLCSP50747 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLCSP50747 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLCSP50747 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.92■□□□□ 0.94
HLCSP50747 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLCSP50747 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.92■□□□□ 0.94
HLCSP50747 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLCSP50747 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.92■□□□□ 0.94
HLCSP50747 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLCSP50747 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLCSP50747 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLCSP50747 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.92■□□□□ 0.94
HLCSP50747 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.92■□□□□ 0.94
HLCSP50747 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLCSP50747 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HLCSP50747 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLCSP50747 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLCSP50747 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HLCSP50747 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLCSP50747 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.91■□□□□ 0.94
HLCSP50747 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLCSP50747 AC133561.4-201ENST00000566112 224 ntBASIC20.91■□□□□ 0.94
HLCSP50747 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.91■□□□□ 0.94
HLCSP50747 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.91■□□□□ 0.94
HLCSP50747 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
HLCSP50747 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HLCSP50747 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLCSP50747 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLCSP50747 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLCSP50747 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.9■□□□□ 0.94
HLCSP50747 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLCSP50747 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLCSP50747 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLCSP50747 AC009102.2-201ENST00000606772 1639 ntBASIC20.9■□□□□ 0.94
HLCSP50747 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLCSP50747 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.9■□□□□ 0.94
HLCSP50747 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HLCSP50747 UNC93B3-201ENST00000308076 687 ntBASIC20.9■□□□□ 0.94
HLCSP50747 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLCSP50747 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLCSP50747 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLCSP50747 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HLCSP50747 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLCSP50747 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLCSP50747 AC242852.2-201ENST00000615738 1807 ntBASIC20.9■□□□□ 0.94
HLCSP50747 ALDH1A3-203ENST00000557963 1670 ntBASIC20.89■□□□□ 0.94
HLCSP50747 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.89■□□□□ 0.94
HLCSP50747 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
HLCSP50747 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HLCSP50747 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.89■□□□□ 0.93
HLCSP50747 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.89■□□□□ 0.93
HLCSP50747 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLCSP50747 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
HLCSP50747 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.89■□□□□ 0.93
HLCSP50747 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLCSP50747 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLCSP50747 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLCSP50747 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLCSP50747 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLCSP50747 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
HLCSP50747 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLCSP50747 PBX2P1-201ENST00000493219 1291 ntBASIC20.88■□□□□ 0.93
HLCSP50747 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLCSP50747 DUX4L19-201ENST00000557448 1267 ntBASIC20.88■□□□□ 0.93
HLCSP50747 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLCSP50747 AC092171.4-201ENST00000609130 632 ntBASIC20.88■□□□□ 0.93
HLCSP50747 AC106739.1-201ENST00000617035 715 ntBASIC20.88■□□□□ 0.93
HLCSP50747 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.88■□□□□ 0.93
HLCSP50747 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLCSP50747 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLCSP50747 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLCSP50747 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLCSP50747 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLCSP50747 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.87■□□□□ 0.93
HLCSP50747 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.87■□□□□ 0.93
HLCSP50747 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.87■□□□□ 0.93
HLCSP50747 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.87■□□□□ 0.93
HLCSP50747 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLCSP50747 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.87■□□□□ 0.93
HLCSP50747 AL136162.1-201ENST00000607711 1078 ntBASIC20.87■□□□□ 0.93
HLCSP50747 AC005837.3-201ENST00000612163 286 ntBASIC20.87■□□□□ 0.93
HLCSP50747 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLCSP50747 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLCSP50747 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLCSP50747 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLCSP50747 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.87■□□□□ 0.93
HLCSP50747 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.87■□□□□ 0.93
HLCSP50747 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HLCSP50747 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms