Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CPS1P31327 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC31.57■■■□□ 2.64
CPS1P31327 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC31.57■■■□□ 2.64
CPS1P31327 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
CPS1P31327 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CPS1P31327 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
CPS1P31327 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CPS1P31327 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CPS1P31327 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CPS1P31327 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
CPS1P31327 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
CPS1P31327 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
CPS1P31327 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CPS1P31327 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC31.55■■■□□ 2.64
CPS1P31327 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC31.55■■■□□ 2.64
CPS1P31327 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CPS1P31327 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC31.55■■■□□ 2.64
CPS1P31327 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CPS1P31327 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC31.55■■■□□ 2.64
CPS1P31327 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CPS1P31327 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC31.55■■■□□ 2.64
CPS1P31327 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CPS1P31327 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CPS1P31327 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC31.54■■■□□ 2.64
CPS1P31327 TESC-206ENST00000541210 936 ntTSL 3 BASIC31.54■■■□□ 2.64
CPS1P31327 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC31.54■■■□□ 2.64
CPS1P31327 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CPS1P31327 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
CPS1P31327 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CPS1P31327 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC31.54■■■□□ 2.64
CPS1P31327 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
CPS1P31327 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC31.54■■■□□ 2.64
CPS1P31327 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC31.54■■■□□ 2.64
CPS1P31327 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC31.54■■■□□ 2.64
CPS1P31327 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CPS1P31327 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC31.53■■■□□ 2.64
CPS1P31327 DUX4L16-201ENST00000555130 1264 ntBASIC31.53■■■□□ 2.64
CPS1P31327 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC31.53■■■□□ 2.64
CPS1P31327 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CPS1P31327 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CPS1P31327 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
CPS1P31327 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC31.52■■■□□ 2.64
CPS1P31327 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC31.52■■■□□ 2.64
CPS1P31327 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
CPS1P31327 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CPS1P31327 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
CPS1P31327 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
CPS1P31327 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC31.51■■■□□ 2.63
CPS1P31327 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC31.51■■■□□ 2.63
CPS1P31327 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC31.51■■■□□ 2.63
CPS1P31327 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
CPS1P31327 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
CPS1P31327 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CPS1P31327 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC31.51■■■□□ 2.63
CPS1P31327 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC31.5■■■□□ 2.63
CPS1P31327 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC31.5■■■□□ 2.63
CPS1P31327 SHF-207ENST00000560540 2062 ntTSL 5 BASIC31.5■■■□□ 2.63
CPS1P31327 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CPS1P31327 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CPS1P31327 BX005040.4-201ENST00000637145 1518 ntBASIC31.5■■■□□ 2.63
CPS1P31327 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CPS1P31327 AC007322.1-201ENST00000426983 750 ntBASIC31.49■■■□□ 2.63
CPS1P31327 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC31.49■■■□□ 2.63
CPS1P31327 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CPS1P31327 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CPS1P31327 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CPS1P31327 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC31.48■■■□□ 2.63
CPS1P31327 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
CPS1P31327 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CPS1P31327 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC31.48■■■□□ 2.63
CPS1P31327 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CPS1P31327 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC31.47■■■□□ 2.63
CPS1P31327 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
CPS1P31327 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CPS1P31327 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC31.46■■■□□ 2.63
CPS1P31327 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC31.46■■■□□ 2.63
CPS1P31327 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC31.46■■■□□ 2.63
CPS1P31327 AP006294.2-201ENST00000641667 209 ntBASIC31.46■■■□□ 2.63
CPS1P31327 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
CPS1P31327 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CPS1P31327 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CPS1P31327 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC31.45■■■□□ 2.63
CPS1P31327 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC31.45■■■□□ 2.63
CPS1P31327 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CPS1P31327 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC31.45■■■□□ 2.63
CPS1P31327 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CPS1P31327 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CPS1P31327 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC31.45■■■□□ 2.62
CPS1P31327 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC31.44■■■□□ 2.62
CPS1P31327 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC31.44■■■□□ 2.62
CPS1P31327 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC31.44■■■□□ 2.62
CPS1P31327 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
CPS1P31327 RARA-203ENST00000394086 2008 ntTSL 2 BASIC31.44■■■□□ 2.62
CPS1P31327 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC31.44■■■□□ 2.62
CPS1P31327 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC31.44■■■□□ 2.62
CPS1P31327 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CPS1P31327 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CPS1P31327 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC31.44■■■□□ 2.62
CPS1P31327 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CPS1P31327 GCSHP5-201ENST00000443090 522 ntBASIC31.44■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms