Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.83■□□□□ 0.61
APCP25054 ALDH1A3-203ENST00000557963 1670 ntBASIC18.83■□□□□ 0.61
APCP25054 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APCP25054 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APCP25054 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
APCP25054 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APCP25054 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APCP25054 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APCP25054 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.83■□□□□ 0.6
APCP25054 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
APCP25054 AC104187.1-201ENST00000607510 612 ntBASIC18.83■□□□□ 0.6
APCP25054 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APCP25054 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APCP25054 KRT87P-202ENST00000534226 1464 ntBASIC18.83■□□□□ 0.6
APCP25054 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APCP25054 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.83■□□□□ 0.6
APCP25054 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.82■□□□□ 0.6
APCP25054 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
APCP25054 AC083880.1-201ENST00000608266 535 ntBASIC18.82■□□□□ 0.6
APCP25054 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.82■□□□□ 0.6
APCP25054 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APCP25054 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
APCP25054 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
APCP25054 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APCP25054 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.82■□□□□ 0.6
APCP25054 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
APCP25054 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APCP25054 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.82■□□□□ 0.6
APCP25054 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.82■□□□□ 0.6
APCP25054 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.82■□□□□ 0.6
APCP25054 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
APCP25054 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
APCP25054 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
APCP25054 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.81■□□□□ 0.6
APCP25054 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
APCP25054 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APCP25054 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
APCP25054 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.81■□□□□ 0.6
APCP25054 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.81■□□□□ 0.6
APCP25054 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.81■□□□□ 0.6
APCP25054 AC105036.2-201ENST00000569468 176 ntBASIC18.81■□□□□ 0.6
APCP25054 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
APCP25054 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APCP25054 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
APCP25054 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APCP25054 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
APCP25054 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.8■□□□□ 0.6
APCP25054 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
APCP25054 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.8■□□□□ 0.6
APCP25054 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.8■□□□□ 0.6
APCP25054 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.8■□□□□ 0.6
APCP25054 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.8■□□□□ 0.6
APCP25054 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.8■□□□□ 0.6
APCP25054 AC006058.3-201ENST00000606217 1069 ntBASIC18.8■□□□□ 0.6
APCP25054 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
APCP25054 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APCP25054 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
APCP25054 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
APCP25054 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.8■□□□□ 0.6
APCP25054 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.8■□□□□ 0.6
APCP25054 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APCP25054 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APCP25054 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
APCP25054 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.8■□□□□ 0.6
APCP25054 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
APCP25054 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.79■□□□□ 0.6
APCP25054 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
APCP25054 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.79■□□□□ 0.6
APCP25054 RPS2P4-201ENST00000476944 856 ntBASIC18.79■□□□□ 0.6
APCP25054 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.79■□□□□ 0.6
APCP25054 AC079140.4-201ENST00000507448 529 ntBASIC18.79■□□□□ 0.6
APCP25054 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
APCP25054 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.79■□□□□ 0.6
APCP25054 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
APCP25054 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
APCP25054 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APCP25054 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APCP25054 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.78■□□□□ 0.6
APCP25054 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
APCP25054 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
APCP25054 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APCP25054 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.78■□□□□ 0.6
APCP25054 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.78■□□□□ 0.6
APCP25054 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APCP25054 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APCP25054 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APCP25054 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
APCP25054 AC092803.2-201ENST00000564287 1899 ntBASIC18.78■□□□□ 0.6
APCP25054 FP325331.1-202ENST00000623531 1380 ntBASIC18.77■□□□□ 0.6
APCP25054 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
APCP25054 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
APCP25054 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
APCP25054 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APCP25054 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APCP25054 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.77■□□□□ 0.6
APCP25054 MIR4758-201ENST00000577688 71 ntBASIC18.77■□□□□ 0.6
APCP25054 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
APCP25054 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.77■□□□□ 0.59
APCP25054 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
APCP25054 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms