Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MMP11P24347 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP11P24347 AC092068.2-201ENST00000590491 1708 ntBASIC20.86■□□□□ 0.93
MMP11P24347 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP11P24347 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
MMP11P24347 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.86■□□□□ 0.93
MMP11P24347 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MMP11P24347 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.86■□□□□ 0.93
MMP11P24347 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP11P24347 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP11P24347 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.85■□□□□ 0.93
MMP11P24347 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.85■□□□□ 0.93
MMP11P24347 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP11P24347 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP11P24347 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP11P24347 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.85■□□□□ 0.93
MMP11P24347 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
MMP11P24347 AC097381.1-201ENST00000429019 1296 ntBASIC20.85■□□□□ 0.93
MMP11P24347 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.85■□□□□ 0.93
MMP11P24347 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.85■□□□□ 0.93
MMP11P24347 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.85■□□□□ 0.93
MMP11P24347 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
MMP11P24347 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MMP11P24347 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MMP11P24347 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP11P24347 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MMP11P24347 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MMP11P24347 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
MMP11P24347 DUSP8P3-201ENST00000399571 1760 ntBASIC20.85■□□□□ 0.93
MMP11P24347 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.85■□□□□ 0.93
MMP11P24347 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
MMP11P24347 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MMP11P24347 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
MMP11P24347 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
MMP11P24347 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.84■□□□□ 0.93
MMP11P24347 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.84■□□□□ 0.93
MMP11P24347 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.84■□□□□ 0.93
MMP11P24347 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MMP11P24347 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
MMP11P24347 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP11P24347 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MMP11P24347 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MMP11P24347 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MMP11P24347 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MMP11P24347 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.83■□□□□ 0.93
MMP11P24347 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.83■□□□□ 0.93
MMP11P24347 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MMP11P24347 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MMP11P24347 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
MMP11P24347 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
MMP11P24347 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.83■□□□□ 0.92
MMP11P24347 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.83■□□□□ 0.92
MMP11P24347 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MMP11P24347 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MMP11P24347 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
MMP11P24347 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
MMP11P24347 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.82■□□□□ 0.92
MMP11P24347 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MMP11P24347 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.82■□□□□ 0.92
MMP11P24347 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
MMP11P24347 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MMP11P24347 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MMP11P24347 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MMP11P24347 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
MMP11P24347 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MMP11P24347 AL117328.2-201ENST00000624617 1940 ntBASIC20.81■□□□□ 0.92
MMP11P24347 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP11P24347 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP11P24347 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.81■□□□□ 0.92
MMP11P24347 OR2I1P-207ENST00000453522 948 ntBASIC20.81■□□□□ 0.92
MMP11P24347 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.81■□□□□ 0.92
MMP11P24347 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.81■□□□□ 0.92
MMP11P24347 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP11P24347 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.81■□□□□ 0.92
MMP11P24347 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MMP11P24347 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.81■□□□□ 0.92
MMP11P24347 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.81■□□□□ 0.92
MMP11P24347 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP11P24347 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MMP11P24347 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.81■□□□□ 0.92
MMP11P24347 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP11P24347 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP11P24347 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MMP11P24347 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP11P24347 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP11P24347 TSPY26P-201ENST00000476365 1326 ntBASIC20.8■□□□□ 0.92
MMP11P24347 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP11P24347 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
MMP11P24347 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP11P24347 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
MMP11P24347 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MMP11P24347 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP11P24347 IGHV3-19-201ENST00000521488 291 ntBASIC20.8■□□□□ 0.92
MMP11P24347 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.8■□□□□ 0.92
MMP11P24347 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.8■□□□□ 0.92
MMP11P24347 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
MMP11P24347 AC233723.2-201ENST00000623798 2106 ntBASIC20.8■□□□□ 0.92
MMP11P24347 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.79■□□□□ 0.92
MMP11P24347 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MMP11P24347 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms