Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF1BP20333 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF1BP20333 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF1BP20333 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNFRSF1BP20333 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.4■□□□□ 0.86
TNFRSF1BP20333 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.4■□□□□ 0.86
TNFRSF1BP20333 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.4■□□□□ 0.86
TNFRSF1BP20333 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.4■□□□□ 0.86
TNFRSF1BP20333 AC021242.3-201ENST00000607598 1377 ntBASIC20.4■□□□□ 0.86
TNFRSF1BP20333 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNFRSF1BP20333 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNFRSF1BP20333 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
TNFRSF1BP20333 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNFRSF1BP20333 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNFRSF1BP20333 MIR6722-201ENST00000617286 78 ntBASIC20.39■□□□□ 0.85
TNFRSF1BP20333 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNFRSF1BP20333 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.39■□□□□ 0.85
TNFRSF1BP20333 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFRSF1BP20333 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TNFRSF1BP20333 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFRSF1BP20333 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFRSF1BP20333 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TNFRSF1BP20333 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TNFRSF1BP20333 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFRSF1BP20333 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
TNFRSF1BP20333 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TNFRSF1BP20333 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TNFRSF1BP20333 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TNFRSF1BP20333 LINC01960-201ENST00000563759 1884 ntBASIC20.37■□□□□ 0.85
TNFRSF1BP20333 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.37■□□□□ 0.85
TNFRSF1BP20333 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFRSF1BP20333 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFRSF1BP20333 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFRSF1BP20333 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TNFRSF1BP20333 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFRSF1BP20333 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TNFRSF1BP20333 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFRSF1BP20333 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.37■□□□□ 0.85
TNFRSF1BP20333 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.37■□□□□ 0.85
TNFRSF1BP20333 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.37■□□□□ 0.85
TNFRSF1BP20333 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFRSF1BP20333 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFRSF1BP20333 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFRSF1BP20333 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFRSF1BP20333 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFRSF1BP20333 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.36■□□□□ 0.85
TNFRSF1BP20333 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFRSF1BP20333 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TNFRSF1BP20333 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TNFRSF1BP20333 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.36■□□□□ 0.85
TNFRSF1BP20333 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.36■□□□□ 0.85
TNFRSF1BP20333 FP325331.1-202ENST00000623531 1380 ntBASIC20.35■□□□□ 0.85
TNFRSF1BP20333 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFRSF1BP20333 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TNFRSF1BP20333 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.35■□□□□ 0.85
TNFRSF1BP20333 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.35■□□□□ 0.85
TNFRSF1BP20333 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFRSF1BP20333 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TNFRSF1BP20333 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TNFRSF1BP20333 BX664725.1-201ENST00000438252 379 ntBASIC20.35■□□□□ 0.85
TNFRSF1BP20333 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFRSF1BP20333 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TNFRSF1BP20333 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFRSF1BP20333 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF1BP20333 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF1BP20333 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TNFRSF1BP20333 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF1BP20333 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF1BP20333 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF1BP20333 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF1BP20333 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TNFRSF1BP20333 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF1BP20333 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.34■□□□□ 0.85
TNFRSF1BP20333 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.34■□□□□ 0.85
TNFRSF1BP20333 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.34■□□□□ 0.85
TNFRSF1BP20333 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.34■□□□□ 0.85
TNFRSF1BP20333 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF1BP20333 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF1BP20333 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF1BP20333 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF1BP20333 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF1BP20333 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFRSF1BP20333 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFRSF1BP20333 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
TNFRSF1BP20333 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFRSF1BP20333 AC004687.1-201ENST00000579003 1625 ntBASIC20.33■□□□□ 0.84
TNFRSF1BP20333 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFRSF1BP20333 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.33■□□□□ 0.84
TNFRSF1BP20333 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.33■□□□□ 0.84
TNFRSF1BP20333 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
TNFRSF1BP20333 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TNFRSF1BP20333 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
TNFRSF1BP20333 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF1BP20333 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF1BP20333 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF1BP20333 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TNFRSF1BP20333 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.32■□□□□ 0.84
TNFRSF1BP20333 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF1BP20333 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.32■□□□□ 0.84
TNFRSF1BP20333 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms