Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.27■□□□□ 0.68
ATF1P18846 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.27■□□□□ 0.68
ATF1P18846 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.27■□□□□ 0.68
ATF1P18846 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ATF1P18846 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.27■□□□□ 0.68
ATF1P18846 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.27■□□□□ 0.68
ATF1P18846 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATF1P18846 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.27■□□□□ 0.68
ATF1P18846 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF1P18846 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ATF1P18846 PKD1P6-201ENST00000343738 4769 ntBASIC19.27■□□□□ 0.67
ATF1P18846 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF1P18846 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF1P18846 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATF1P18846 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.26■□□□□ 0.67
ATF1P18846 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF1P18846 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF1P18846 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.26■□□□□ 0.67
ATF1P18846 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.26■□□□□ 0.67
ATF1P18846 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATF1P18846 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF1P18846 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ATF1P18846 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.26■□□□□ 0.67
ATF1P18846 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
ATF1P18846 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.26■□□□□ 0.67
ATF1P18846 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATF1P18846 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.25■□□□□ 0.67
ATF1P18846 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.25■□□□□ 0.67
ATF1P18846 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
ATF1P18846 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATF1P18846 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATF1P18846 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.25■□□□□ 0.67
ATF1P18846 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ATF1P18846 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF1P18846 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF1P18846 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.25■□□□□ 0.67
ATF1P18846 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.25■□□□□ 0.67
ATF1P18846 AC137630.3-201ENST00000607245 391 ntBASIC19.25■□□□□ 0.67
ATF1P18846 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ATF1P18846 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.25■□□□□ 0.67
ATF1P18846 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF1P18846 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ATF1P18846 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF1P18846 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATF1P18846 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATF1P18846 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATF1P18846 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.24■□□□□ 0.67
ATF1P18846 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.24■□□□□ 0.67
ATF1P18846 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.24■□□□□ 0.67
ATF1P18846 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATF1P18846 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATF1P18846 FAM99A-202ENST00000538190 1989 ntBASIC19.24■□□□□ 0.67
ATF1P18846 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATF1P18846 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATF1P18846 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.24■□□□□ 0.67
ATF1P18846 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF1P18846 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF1P18846 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF1P18846 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF1P18846 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.23■□□□□ 0.67
ATF1P18846 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATF1P18846 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATF1P18846 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.23■□□□□ 0.67
ATF1P18846 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF1P18846 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATF1P18846 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ATF1P18846 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.23■□□□□ 0.67
ATF1P18846 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.23■□□□□ 0.67
ATF1P18846 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.23■□□□□ 0.67
ATF1P18846 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ATF1P18846 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.23■□□□□ 0.67
ATF1P18846 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF1P18846 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF1P18846 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ATF1P18846 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
ATF1P18846 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ATF1P18846 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATF1P18846 AC010542.4-201ENST00000563151 1910 ntBASIC19.22■□□□□ 0.67
ATF1P18846 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.22■□□□□ 0.67
ATF1P18846 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
ATF1P18846 AL031848.2-201ENST00000607670 837 ntBASIC19.22■□□□□ 0.67
ATF1P18846 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATF1P18846 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATF1P18846 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATF1P18846 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF1P18846 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF1P18846 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF1P18846 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
ATF1P18846 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF1P18846 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF1P18846 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.21■□□□□ 0.67
ATF1P18846 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ATF1P18846 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.21■□□□□ 0.67
ATF1P18846 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.21■□□□□ 0.67
ATF1P18846 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.21■□□□□ 0.67
ATF1P18846 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF1P18846 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF1P18846 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ATF1P18846 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.21■□□□□ 0.67
ATF1P18846 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms