Protein–RNA interactions for Protein: P0CB38

PABPC4L, Polyadenylate-binding protein 4-like, humanhuman

Known RBP Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4LP0CB38 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PABPC4LP0CB38 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PABPC4LP0CB38 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PABPC4LP0CB38 C11orf96-202ENST00000528572 1834 ntBASIC20.93■□□□□ 0.94
PABPC4LP0CB38 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.93■□□□□ 0.94
PABPC4LP0CB38 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PABPC4LP0CB38 BX664725.1-201ENST00000438252 379 ntBASIC20.93■□□□□ 0.94
PABPC4LP0CB38 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.93■□□□□ 0.94
PABPC4LP0CB38 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PABPC4LP0CB38 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PABPC4LP0CB38 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PABPC4LP0CB38 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.93■□□□□ 0.94
PABPC4LP0CB38 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.93■□□□□ 0.94
PABPC4LP0CB38 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PABPC4LP0CB38 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PABPC4LP0CB38 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 ESRRAP2-201ENST00000418437 1549 ntBASIC20.92■□□□□ 0.94
PABPC4LP0CB38 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PABPC4LP0CB38 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PABPC4LP0CB38 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PABPC4LP0CB38 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PABPC4LP0CB38 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PABPC4LP0CB38 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PABPC4LP0CB38 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PABPC4LP0CB38 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PABPC4LP0CB38 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PABPC4LP0CB38 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PABPC4LP0CB38 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PABPC4LP0CB38 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PABPC4LP0CB38 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.9■□□□□ 0.94
PABPC4LP0CB38 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.9■□□□□ 0.94
PABPC4LP0CB38 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PABPC4LP0CB38 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
PABPC4LP0CB38 KRT125P-201ENST00000546827 989 ntBASIC20.9■□□□□ 0.94
PABPC4LP0CB38 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.9■□□□□ 0.94
PABPC4LP0CB38 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PABPC4LP0CB38 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PABPC4LP0CB38 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PABPC4LP0CB38 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
PABPC4LP0CB38 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PABPC4LP0CB38 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PABPC4LP0CB38 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PABPC4LP0CB38 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PABPC4LP0CB38 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PABPC4LP0CB38 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PABPC4LP0CB38 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PABPC4LP0CB38 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PABPC4LP0CB38 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.89■□□□□ 0.93
PABPC4LP0CB38 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PABPC4LP0CB38 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.89■□□□□ 0.93
PABPC4LP0CB38 AC137630.3-201ENST00000607245 391 ntBASIC20.89■□□□□ 0.93
PABPC4LP0CB38 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PABPC4LP0CB38 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PABPC4LP0CB38 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PABPC4LP0CB38 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PABPC4LP0CB38 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PABPC4LP0CB38 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PABPC4LP0CB38 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
PABPC4LP0CB38 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.88■□□□□ 0.93
PABPC4LP0CB38 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.88■□□□□ 0.93
PABPC4LP0CB38 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.88■□□□□ 0.93
PABPC4LP0CB38 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PABPC4LP0CB38 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PABPC4LP0CB38 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PABPC4LP0CB38 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.87■□□□□ 0.93
PABPC4LP0CB38 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PABPC4LP0CB38 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PABPC4LP0CB38 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PABPC4LP0CB38 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PABPC4LP0CB38 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PABPC4LP0CB38 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PABPC4LP0CB38 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.87■□□□□ 0.93
PABPC4LP0CB38 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.87■□□□□ 0.93
PABPC4LP0CB38 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PABPC4LP0CB38 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
PABPC4LP0CB38 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
PABPC4LP0CB38 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PABPC4LP0CB38 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PABPC4LP0CB38 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PABPC4LP0CB38 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PABPC4LP0CB38 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PABPC4LP0CB38 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PABPC4LP0CB38 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms