Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNYL3P0C7X3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.1■□□□□ 0.97
CCNYL3P0C7X3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNYL3P0C7X3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNYL3P0C7X3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNYL3P0C7X3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNYL3P0C7X3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.1■□□□□ 0.97
CCNYL3P0C7X3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.1■□□□□ 0.97
CCNYL3P0C7X3 AL499627.2-201ENST00000606283 725 ntBASIC21.1■□□□□ 0.97
CCNYL3P0C7X3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNYL3P0C7X3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNYL3P0C7X3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.1■□□□□ 0.97
CCNYL3P0C7X3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNYL3P0C7X3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.09■□□□□ 0.97
CCNYL3P0C7X3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
CCNYL3P0C7X3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.09■□□□□ 0.97
CCNYL3P0C7X3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNYL3P0C7X3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNYL3P0C7X3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNYL3P0C7X3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNYL3P0C7X3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.09■□□□□ 0.97
CCNYL3P0C7X3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.09■□□□□ 0.97
CCNYL3P0C7X3 AL358852.1-201ENST00000623174 1268 ntBASIC21.09■□□□□ 0.97
CCNYL3P0C7X3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.09■□□□□ 0.97
CCNYL3P0C7X3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNYL3P0C7X3 AC068473.5-201ENST00000616428 2072 ntBASIC21.09■□□□□ 0.97
CCNYL3P0C7X3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNYL3P0C7X3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNYL3P0C7X3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNYL3P0C7X3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNYL3P0C7X3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNYL3P0C7X3 AC034268.1-201ENST00000441047 882 ntBASIC21.08■□□□□ 0.97
CCNYL3P0C7X3 IGHV3-19-201ENST00000521488 291 ntBASIC21.08■□□□□ 0.97
CCNYL3P0C7X3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.08■□□□□ 0.97
CCNYL3P0C7X3 DUX4L4-201ENST00000566884 1269 ntBASIC21.08■□□□□ 0.97
CCNYL3P0C7X3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.08■□□□□ 0.97
CCNYL3P0C7X3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.08■□□□□ 0.97
CCNYL3P0C7X3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCNYL3P0C7X3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
CCNYL3P0C7X3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNYL3P0C7X3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCNYL3P0C7X3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.07■□□□□ 0.96
CCNYL3P0C7X3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
CCNYL3P0C7X3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.07■□□□□ 0.96
CCNYL3P0C7X3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCNYL3P0C7X3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CCNYL3P0C7X3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNYL3P0C7X3 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 YBX1P1-201ENST00000445822 960 ntBASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 LINC01529-204ENST00000636474 1715 ntBASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNYL3P0C7X3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 MIR572-201ENST00000384983 95 ntBASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCNYL3P0C7X3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCNYL3P0C7X3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.04■□□□□ 0.96
CCNYL3P0C7X3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.04■□□□□ 0.96
CCNYL3P0C7X3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.04■□□□□ 0.96
CCNYL3P0C7X3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCNYL3P0C7X3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.04■□□□□ 0.96
CCNYL3P0C7X3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.04■□□□□ 0.96
CCNYL3P0C7X3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCNYL3P0C7X3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCNYL3P0C7X3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.04■□□□□ 0.96
CCNYL3P0C7X3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.04■□□□□ 0.96
CCNYL3P0C7X3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCNYL3P0C7X3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCNYL3P0C7X3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.04■□□□□ 0.96
CCNYL3P0C7X3 AC144652.1-201ENST00000609974 1624 ntBASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms