Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL3P09001 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL3P09001 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL3P09001 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL3P09001 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.68■□□□□ 0.74
MRPL3P09001 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL3P09001 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL3P09001 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL3P09001 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL3P09001 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL3P09001 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL3P09001 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.68■□□□□ 0.74
MRPL3P09001 AC103724.3-201ENST00000564481 992 ntBASIC19.68■□□□□ 0.74
MRPL3P09001 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
MRPL3P09001 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.68■□□□□ 0.74
MRPL3P09001 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
MRPL3P09001 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
MRPL3P09001 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL3P09001 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL3P09001 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL3P09001 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
MRPL3P09001 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL3P09001 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
MRPL3P09001 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.67■□□□□ 0.74
MRPL3P09001 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL3P09001 AC012354.3-201ENST00000623734 483 ntBASIC19.67■□□□□ 0.74
MRPL3P09001 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL3P09001 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL3P09001 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL3P09001 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
MRPL3P09001 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL3P09001 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MRPL3P09001 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MRPL3P09001 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRPL3P09001 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRPL3P09001 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.66■□□□□ 0.74
MRPL3P09001 YBX1P4-201ENST00000392794 808 ntBASIC19.66■□□□□ 0.74
MRPL3P09001 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.66■□□□□ 0.74
MRPL3P09001 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MRPL3P09001 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRPL3P09001 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRPL3P09001 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.66■□□□□ 0.74
MRPL3P09001 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRPL3P09001 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.65■□□□□ 0.74
MRPL3P09001 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
MRPL3P09001 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
MRPL3P09001 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRPL3P09001 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRPL3P09001 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.65■□□□□ 0.74
MRPL3P09001 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.65■□□□□ 0.74
MRPL3P09001 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.65■□□□□ 0.74
MRPL3P09001 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.65■□□□□ 0.74
MRPL3P09001 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.65■□□□□ 0.74
MRPL3P09001 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.65■□□□□ 0.74
MRPL3P09001 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.65■□□□□ 0.74
MRPL3P09001 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRPL3P09001 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
MRPL3P09001 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
MRPL3P09001 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.65■□□□□ 0.74
MRPL3P09001 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRPL3P09001 LINC01529-204ENST00000636474 1715 ntBASIC19.65■□□□□ 0.74
MRPL3P09001 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
MRPL3P09001 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MRPL3P09001 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
MRPL3P09001 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.64■□□□□ 0.74
MRPL3P09001 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
MRPL3P09001 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MRPL3P09001 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MRPL3P09001 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MRPL3P09001 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.64■□□□□ 0.73
MRPL3P09001 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.63■□□□□ 0.73
MRPL3P09001 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRPL3P09001 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MRPL3P09001 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRPL3P09001 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRPL3P09001 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRPL3P09001 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRPL3P09001 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRPL3P09001 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MRPL3P09001 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
MRPL3P09001 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRPL3P09001 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MRPL3P09001 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.62■□□□□ 0.73
MRPL3P09001 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRPL3P09001 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRPL3P09001 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MRPL3P09001 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.62■□□□□ 0.73
MRPL3P09001 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.62■□□□□ 0.73
MRPL3P09001 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.62■□□□□ 0.73
MRPL3P09001 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.62■□□□□ 0.73
MRPL3P09001 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.62■□□□□ 0.73
MRPL3P09001 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MRPL3P09001 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
MRPL3P09001 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRPL3P09001 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
MRPL3P09001 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MRPL3P09001 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MRPL3P09001 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.61■□□□□ 0.73
MRPL3P09001 AC005703.6-201ENST00000623265 1329 ntBASIC19.61■□□□□ 0.73
MRPL3P09001 AC137630.3-201ENST00000607245 391 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms