Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RETP07949 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RETP07949 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.21■■□□□ 1.15
RETP07949 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RETP07949 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.21■■□□□ 1.15
RETP07949 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RETP07949 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RETP07949 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.2■■□□□ 1.14
RETP07949 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.2■■□□□ 1.14
RETP07949 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RETP07949 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.2■■□□□ 1.14
RETP07949 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RETP07949 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RETP07949 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
RETP07949 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RETP07949 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
RETP07949 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RETP07949 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RETP07949 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
RETP07949 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.19■■□□□ 1.14
RETP07949 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.19■■□□□ 1.14
RETP07949 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.19■■□□□ 1.14
RETP07949 AC133561.1-201ENST00000568600 2415 ntBASIC22.19■■□□□ 1.14
RETP07949 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RETP07949 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
RETP07949 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.19■■□□□ 1.14
RETP07949 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.19■■□□□ 1.14
RETP07949 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.19■■□□□ 1.14
RETP07949 OR2I1P-207ENST00000453522 948 ntBASIC22.19■■□□□ 1.14
RETP07949 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.19■■□□□ 1.14
RETP07949 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.19■■□□□ 1.14
RETP07949 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RETP07949 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.19■■□□□ 1.14
RETP07949 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RETP07949 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.19■■□□□ 1.14
RETP07949 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RETP07949 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RETP07949 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.18■■□□□ 1.14
RETP07949 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RETP07949 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.18■■□□□ 1.14
RETP07949 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RETP07949 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.18■■□□□ 1.14
RETP07949 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.18■■□□□ 1.14
RETP07949 AC010525.1-201ENST00000585559 441 ntBASIC22.18■■□□□ 1.14
RETP07949 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.18■■□□□ 1.14
RETP07949 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RETP07949 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.18■■□□□ 1.14
RETP07949 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RETP07949 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
RETP07949 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
RETP07949 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
RETP07949 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
RETP07949 AL161729.1-201ENST00000604104 1402 ntBASIC22.17■■□□□ 1.14
RETP07949 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.17■■□□□ 1.14
RETP07949 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.17■■□□□ 1.14
RETP07949 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RETP07949 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RETP07949 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RETP07949 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RETP07949 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RETP07949 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.17■■□□□ 1.14
RETP07949 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.17■■□□□ 1.14
RETP07949 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.17■■□□□ 1.14
RETP07949 MIR6089-201ENST00000616698 64 ntBASIC22.17■■□□□ 1.14
RETP07949 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RETP07949 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RETP07949 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.16■■□□□ 1.14
RETP07949 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RETP07949 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RETP07949 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RETP07949 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RETP07949 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RETP07949 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.16■■□□□ 1.14
RETP07949 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.16■■□□□ 1.14
RETP07949 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
RETP07949 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RETP07949 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.16■■□□□ 1.14
RETP07949 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.16■■□□□ 1.14
RETP07949 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
RETP07949 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RETP07949 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.15■■□□□ 1.14
RETP07949 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.15■■□□□ 1.14
RETP07949 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.15■■□□□ 1.14
RETP07949 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RETP07949 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.15■■□□□ 1.14
RETP07949 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.15■■□□□ 1.14
RETP07949 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.15■■□□□ 1.14
RETP07949 AL499627.2-201ENST00000606283 725 ntBASIC22.15■■□□□ 1.14
RETP07949 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
RETP07949 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RETP07949 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RETP07949 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
RETP07949 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RETP07949 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RETP07949 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RETP07949 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
RETP07949 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RETP07949 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
RETP07949 GPX1P1-201ENST00000388829 606 ntBASIC22.14■■□□□ 1.13
RETP07949 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms