Protein–RNA interactions for Protein: P05388

RPLP0, 60S acidic ribosomal protein P0, humanhuman

Known RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0P05388 AC123595.1-201ENST00000440769 1046 ntBASIC21.48■■□□□ 1.03
RPLP0P05388 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPLP0P05388 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPLP0P05388 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.48■■□□□ 1.03
RPLP0P05388 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.48■■□□□ 1.03
RPLP0P05388 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.48■■□□□ 1.03
RPLP0P05388 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPLP0P05388 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPLP0P05388 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.47■■□□□ 1.03
RPLP0P05388 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.47■■□□□ 1.03
RPLP0P05388 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.47■■□□□ 1.03
RPLP0P05388 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
RPLP0P05388 AC022517.1-201ENST00000592429 346 ntBASIC21.47■■□□□ 1.03
RPLP0P05388 IKBKGP1-201ENST00000612193 1073 ntBASIC21.47■■□□□ 1.03
RPLP0P05388 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
RPLP0P05388 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPLP0P05388 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RPLP0P05388 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPLP0P05388 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPLP0P05388 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPLP0P05388 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RPLP0P05388 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPLP0P05388 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPLP0P05388 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPLP0P05388 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.46■■□□□ 1.03
RPLP0P05388 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RPLP0P05388 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.46■■□□□ 1.03
RPLP0P05388 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RPLP0P05388 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPLP0P05388 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RPLP0P05388 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RPLP0P05388 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPLP0P05388 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPLP0P05388 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPLP0P05388 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.45■■□□□ 1.02
RPLP0P05388 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.45■■□□□ 1.02
RPLP0P05388 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPLP0P05388 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPLP0P05388 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPLP0P05388 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RPLP0P05388 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.45■■□□□ 1.02
RPLP0P05388 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.45■■□□□ 1.02
RPLP0P05388 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPLP0P05388 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPLP0P05388 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPLP0P05388 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPLP0P05388 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RPLP0P05388 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
RPLP0P05388 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RPLP0P05388 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RPLP0P05388 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPLP0P05388 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPLP0P05388 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPLP0P05388 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.43■■□□□ 1.02
RPLP0P05388 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPLP0P05388 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.43■■□□□ 1.02
RPLP0P05388 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.43■■□□□ 1.02
RPLP0P05388 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.43■■□□□ 1.02
RPLP0P05388 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPLP0P05388 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPLP0P05388 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPLP0P05388 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPLP0P05388 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
RPLP0P05388 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPLP0P05388 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPLP0P05388 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RPLP0P05388 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.43■■□□□ 1.02
RPLP0P05388 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPLP0P05388 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPLP0P05388 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RPLP0P05388 CLDN5-201ENST00000403084 2357 ntBASIC21.43■■□□□ 1.02
RPLP0P05388 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.42■■□□□ 1.02
RPLP0P05388 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 DUSP8P5-201ENST00000422884 1815 ntBASIC21.42■■□□□ 1.02
RPLP0P05388 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.42■■□□□ 1.02
RPLP0P05388 AP005435.1-201ENST00000529293 1178 ntBASIC21.42■■□□□ 1.02
RPLP0P05388 CCDC92B-201ENST00000575506 885 ntBASIC21.42■■□□□ 1.02
RPLP0P05388 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 AL137784.2-201ENST00000607332 1000 ntBASIC21.42■■□□□ 1.02
RPLP0P05388 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RPLP0P05388 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RPLP0P05388 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPLP0P05388 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RPLP0P05388 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms