Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.69■□□□□ 0.9
MT-ND1P03886 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.69■□□□□ 0.9
MT-ND1P03886 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.69■□□□□ 0.9
MT-ND1P03886 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MT-ND1P03886 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MT-ND1P03886 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MT-ND1P03886 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.69■□□□□ 0.9
MT-ND1P03886 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MT-ND1P03886 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
MT-ND1P03886 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MT-ND1P03886 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.68■□□□□ 0.9
MT-ND1P03886 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
MT-ND1P03886 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.68■□□□□ 0.9
MT-ND1P03886 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MT-ND1P03886 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.68■□□□□ 0.9
MT-ND1P03886 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.68■□□□□ 0.9
MT-ND1P03886 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MT-ND1P03886 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.68■□□□□ 0.9
MT-ND1P03886 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MT-ND1P03886 AC012354.3-201ENST00000623734 483 ntBASIC20.68■□□□□ 0.9
MT-ND1P03886 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.68■□□□□ 0.9
MT-ND1P03886 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MT-ND1P03886 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.68■□□□□ 0.9
MT-ND1P03886 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.68■□□□□ 0.9
MT-ND1P03886 FAM99A-202ENST00000538190 1989 ntBASIC20.68■□□□□ 0.9
MT-ND1P03886 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MT-ND1P03886 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.68■□□□□ 0.9
MT-ND1P03886 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MT-ND1P03886 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
MT-ND1P03886 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MT-ND1P03886 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MT-ND1P03886 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MT-ND1P03886 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
MT-ND1P03886 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MT-ND1P03886 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MT-ND1P03886 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
MT-ND1P03886 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
MT-ND1P03886 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
MT-ND1P03886 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.67■□□□□ 0.9
MT-ND1P03886 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MT-ND1P03886 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.66■□□□□ 0.9
MT-ND1P03886 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MT-ND1P03886 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MT-ND1P03886 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MT-ND1P03886 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.66■□□□□ 0.9
MT-ND1P03886 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MT-ND1P03886 MIR4281-201ENST00000580852 62 ntBASIC20.66■□□□□ 0.9
MT-ND1P03886 AF131216.4-201ENST00000638924 1588 ntBASIC20.66■□□□□ 0.9
MT-ND1P03886 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MT-ND1P03886 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
MT-ND1P03886 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
MT-ND1P03886 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MT-ND1P03886 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.65■□□□□ 0.9
MT-ND1P03886 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.65■□□□□ 0.9
MT-ND1P03886 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.65■□□□□ 0.9
MT-ND1P03886 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
MT-ND1P03886 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.65■□□□□ 0.9
MT-ND1P03886 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MT-ND1P03886 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MT-ND1P03886 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
MT-ND1P03886 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.64■□□□□ 0.9
MT-ND1P03886 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.64■□□□□ 0.9
MT-ND1P03886 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.64■□□□□ 0.9
MT-ND1P03886 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
MT-ND1P03886 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MT-ND1P03886 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MT-ND1P03886 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
MT-ND1P03886 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.64■□□□□ 0.89
MT-ND1P03886 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.64■□□□□ 0.89
MT-ND1P03886 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.64■□□□□ 0.89
MT-ND1P03886 AC010542.4-201ENST00000563151 1910 ntBASIC20.64■□□□□ 0.89
MT-ND1P03886 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MT-ND1P03886 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MT-ND1P03886 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
MT-ND1P03886 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MT-ND1P03886 AC005229.4-201ENST00000610085 2198 ntBASIC20.63■□□□□ 0.89
MT-ND1P03886 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-ND1P03886 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-ND1P03886 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MT-ND1P03886 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.63■□□□□ 0.89
MT-ND1P03886 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.63■□□□□ 0.89
MT-ND1P03886 MIR4508-201ENST00000584178 70 ntBASIC20.63■□□□□ 0.89
MT-ND1P03886 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.63■□□□□ 0.89
MT-ND1P03886 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.63■□□□□ 0.89
MT-ND1P03886 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-ND1P03886 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
MT-ND1P03886 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MT-ND1P03886 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.63■□□□□ 0.89
MT-ND1P03886 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.62■□□□□ 0.89
MT-ND1P03886 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.62■□□□□ 0.89
MT-ND1P03886 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MT-ND1P03886 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MT-ND1P03886 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.62■□□□□ 0.89
MT-ND1P03886 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MT-ND1P03886 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MT-ND1P03886 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.62■□□□□ 0.89
MT-ND1P03886 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.62■□□□□ 0.89
MT-ND1P03886 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.62■□□□□ 0.89
MT-ND1P03886 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.62■□□□□ 0.89
MT-ND1P03886 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms