Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
HLA-DQB1P01920 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.02■□□□□ 0.64
HLA-DQB1P01920 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQB1P01920 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQB1P01920 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HLA-DQB1P01920 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HLA-DQB1P01920 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQB1P01920 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.02■□□□□ 0.63
HLA-DQB1P01920 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
HLA-DQB1P01920 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.02■□□□□ 0.63
HLA-DQB1P01920 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DQB1P01920 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB1P01920 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB1P01920 AC007952.6-201ENST00000573168 2673 ntBASIC19.01■□□□□ 0.63
HLA-DQB1P01920 AC003957.1-201ENST00000625108 2673 ntBASIC19.01■□□□□ 0.63
HLA-DQB1P01920 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB1P01920 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB1P01920 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB1P01920 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB1P01920 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB1P01920 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.01■□□□□ 0.63
HLA-DQB1P01920 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB1P01920 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB1P01920 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB1P01920 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB1P01920 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
HLA-DQB1P01920 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
HLA-DQB1P01920 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DQB1P01920 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HLA-DQB1P01920 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB1P01920 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DQB1P01920 AC087393.1-201ENST00000582896 145 ntBASIC19■□□□□ 0.63
HLA-DQB1P01920 AC018755.3-202ENST00000596210 929 ntBASIC19■□□□□ 0.63
HLA-DQB1P01920 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB1P01920 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
HLA-DQB1P01920 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19■□□□□ 0.63
HLA-DQB1P01920 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB1P01920 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQB1P01920 RNF126P1-201ENST00000567452 1320 ntBASIC19■□□□□ 0.63
HLA-DQB1P01920 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB1P01920 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB1P01920 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HLA-DQB1P01920 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB1P01920 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HLA-DQB1P01920 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB1P01920 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DQB1P01920 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB1P01920 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB1P01920 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQB1P01920 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB1P01920 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
HLA-DQB1P01920 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HLA-DQB1P01920 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB1P01920 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HLA-DQB1P01920 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DQB1P01920 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB1P01920 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB1P01920 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
HLA-DQB1P01920 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB1P01920 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DQB1P01920 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB1P01920 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB1P01920 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DQB1P01920 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DQB1P01920 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DQB1P01920 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DQB1P01920 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
HLA-DQB1P01920 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.97■□□□□ 0.63
HLA-DQB1P01920 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DQB1P01920 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DQB1P01920 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DQB1P01920 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DQB1P01920 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DQB1P01920 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DQB1P01920 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DQB1P01920 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DQB1P01920 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.96■□□□□ 0.63
HLA-DQB1P01920 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.96■□□□□ 0.63
HLA-DQB1P01920 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.96■□□□□ 0.63
HLA-DQB1P01920 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
HLA-DQB1P01920 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.96■□□□□ 0.63
HLA-DQB1P01920 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DQB1P01920 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB1P01920 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB1P01920 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DQB1P01920 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DQB1P01920 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB1P01920 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DQB1P01920 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB1P01920 SPCS2P3-201ENST00000500401 656 ntBASIC18.95■□□□□ 0.62
HLA-DQB1P01920 AL592293.1-201ENST00000502889 1188 ntBASIC18.95■□□□□ 0.62
HLA-DQB1P01920 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HLA-DQB1P01920 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB1P01920 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.95■□□□□ 0.62
HLA-DQB1P01920 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-DQB1P01920 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB1P01920 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DQB1P01920 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB1P01920 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-DQB1P01920 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms