Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.63■■□□□ 1.37
CSPG5O95196 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
CSPG5O95196 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CSPG5O95196 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CSPG5O95196 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.63■■□□□ 1.37
CSPG5O95196 AC104771.1-201ENST00000603335 964 ntBASIC23.63■■□□□ 1.37
CSPG5O95196 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.63■■□□□ 1.37
CSPG5O95196 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CSPG5O95196 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
CSPG5O95196 AC093323.1-202ENST00000635031 2045 ntBASIC23.62■■□□□ 1.37
CSPG5O95196 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.62■■□□□ 1.37
CSPG5O95196 LINC01529-204ENST00000636474 1715 ntBASIC23.62■■□□□ 1.37
CSPG5O95196 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CSPG5O95196 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSPG5O95196 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.62■■□□□ 1.37
CSPG5O95196 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.62■■□□□ 1.37
CSPG5O95196 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.62■■□□□ 1.37
CSPG5O95196 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.62■■□□□ 1.37
CSPG5O95196 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.62■■□□□ 1.37
CSPG5O95196 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSPG5O95196 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.62■■□□□ 1.37
CSPG5O95196 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CSPG5O95196 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
CSPG5O95196 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CSPG5O95196 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CSPG5O95196 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.61■■□□□ 1.37
CSPG5O95196 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.61■■□□□ 1.37
CSPG5O95196 BID-214ENST00000617586 542 ntTSL 5 BASIC23.61■■□□□ 1.37
CSPG5O95196 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.61■■□□□ 1.37
CSPG5O95196 AC144652.1-201ENST00000609974 1624 ntBASIC23.61■■□□□ 1.37
CSPG5O95196 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CSPG5O95196 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CSPG5O95196 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.61■■□□□ 1.37
CSPG5O95196 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
CSPG5O95196 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.61■■□□□ 1.37
CSPG5O95196 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
CSPG5O95196 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CSPG5O95196 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
CSPG5O95196 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CSPG5O95196 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CSPG5O95196 AC026185.1-201ENST00000445748 174 ntBASIC23.6■■□□□ 1.37
CSPG5O95196 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CSPG5O95196 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CSPG5O95196 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CSPG5O95196 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.6■■□□□ 1.37
CSPG5O95196 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CSPG5O95196 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.6■■□□□ 1.37
CSPG5O95196 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CSPG5O95196 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CSPG5O95196 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
CSPG5O95196 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
CSPG5O95196 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CSPG5O95196 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CSPG5O95196 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.59■■□□□ 1.37
CSPG5O95196 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CSPG5O95196 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.59■■□□□ 1.37
CSPG5O95196 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CSPG5O95196 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
CSPG5O95196 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CSPG5O95196 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.58■■□□□ 1.37
CSPG5O95196 AP004607.4-201ENST00000530158 1459 ntBASIC23.58■■□□□ 1.37
CSPG5O95196 ABHD17AP1-201ENST00000358206 933 ntBASIC23.58■■□□□ 1.37
CSPG5O95196 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CSPG5O95196 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.58■■□□□ 1.37
CSPG5O95196 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.58■■□□□ 1.37
CSPG5O95196 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.58■■□□□ 1.37
CSPG5O95196 TPRG1LP1-201ENST00000598702 760 ntBASIC23.58■■□□□ 1.37
CSPG5O95196 AL109923.1-201ENST00000618799 583 ntBASIC23.58■■□□□ 1.37
CSPG5O95196 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CSPG5O95196 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CSPG5O95196 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
CSPG5O95196 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSPG5O95196 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CSPG5O95196 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSPG5O95196 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSPG5O95196 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSPG5O95196 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
CSPG5O95196 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSPG5O95196 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSPG5O95196 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
CSPG5O95196 FP325331.1-202ENST00000623531 1380 ntBASIC23.57■■□□□ 1.36
CSPG5O95196 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.57■■□□□ 1.36
CSPG5O95196 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSPG5O95196 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CSPG5O95196 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CSPG5O95196 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.57■■□□□ 1.36
CSPG5O95196 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CSPG5O95196 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.57■■□□□ 1.36
CSPG5O95196 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.57■■□□□ 1.36
CSPG5O95196 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.57■■□□□ 1.36
CSPG5O95196 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.57■■□□□ 1.36
CSPG5O95196 AC004687.1-201ENST00000579003 1625 ntBASIC23.57■■□□□ 1.36
CSPG5O95196 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSPG5O95196 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.57■■□□□ 1.36
CSPG5O95196 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
CSPG5O95196 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSPG5O95196 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSPG5O95196 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.56■■□□□ 1.36
CSPG5O95196 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.56■■□□□ 1.36
CSPG5O95196 MIR663A-201ENST00000385250 93 ntBASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms