Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SCAF4O95104 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCAF4O95104 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCAF4O95104 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCAF4O95104 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCAF4O95104 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SCAF4O95104 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCAF4O95104 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.9■□□□□ 0.46
SCAF4O95104 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SCAF4O95104 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
SCAF4O95104 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCAF4O95104 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCAF4O95104 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCAF4O95104 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCAF4O95104 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCAF4O95104 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCAF4O95104 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCAF4O95104 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SCAF4O95104 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCAF4O95104 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.89■□□□□ 0.45
SCAF4O95104 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCAF4O95104 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCAF4O95104 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCAF4O95104 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCAF4O95104 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCAF4O95104 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
SCAF4O95104 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCAF4O95104 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.88■□□□□ 0.45
SCAF4O95104 RNF165-205ENST00000588679 2904 ntBASIC17.88■□□□□ 0.45
SCAF4O95104 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SCAF4O95104 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.88■□□□□ 0.45
SCAF4O95104 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCAF4O95104 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCAF4O95104 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.88■□□□□ 0.45
SCAF4O95104 PVT1_1.1-201ENST00000615125 194 ntBASIC17.88■□□□□ 0.45
SCAF4O95104 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.88■□□□□ 0.45
SCAF4O95104 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.88■□□□□ 0.45
SCAF4O95104 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.88■□□□□ 0.45
SCAF4O95104 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCAF4O95104 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCAF4O95104 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SCAF4O95104 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCAF4O95104 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.87■□□□□ 0.45
SCAF4O95104 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SCAF4O95104 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.87■□□□□ 0.45
SCAF4O95104 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCAF4O95104 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.87■□□□□ 0.45
SCAF4O95104 LONRF2P2-201ENST00000439212 571 ntBASIC17.87■□□□□ 0.45
SCAF4O95104 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.87■□□□□ 0.45
SCAF4O95104 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCAF4O95104 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.87■□□□□ 0.45
SCAF4O95104 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCAF4O95104 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.87■□□□□ 0.45
SCAF4O95104 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCAF4O95104 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SCAF4O95104 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SCAF4O95104 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAF4O95104 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.86■□□□□ 0.45
SCAF4O95104 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAF4O95104 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SCAF4O95104 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAF4O95104 YBX1P4-201ENST00000392794 808 ntBASIC17.86■□□□□ 0.45
SCAF4O95104 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.86■□□□□ 0.45
SCAF4O95104 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.86■□□□□ 0.45
SCAF4O95104 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAF4O95104 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCAF4O95104 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAF4O95104 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCAF4O95104 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
SCAF4O95104 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.86■□□□□ 0.45
SCAF4O95104 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.85■□□□□ 0.45
SCAF4O95104 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCAF4O95104 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SCAF4O95104 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCAF4O95104 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCAF4O95104 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCAF4O95104 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SCAF4O95104 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.85■□□□□ 0.45
SCAF4O95104 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.85■□□□□ 0.45
SCAF4O95104 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCAF4O95104 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SCAF4O95104 C11orf96-202ENST00000528572 1834 ntBASIC17.85■□□□□ 0.45
SCAF4O95104 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.85■□□□□ 0.45
SCAF4O95104 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAF4O95104 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAF4O95104 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCAF4O95104 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SCAF4O95104 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCAF4O95104 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAF4O95104 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCAF4O95104 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.84■□□□□ 0.45
SCAF4O95104 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAF4O95104 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAF4O95104 RARRES2P1-201ENST00000474487 481 ntBASIC17.84■□□□□ 0.45
SCAF4O95104 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAF4O95104 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.84■□□□□ 0.45
SCAF4O95104 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.84■□□□□ 0.45
SCAF4O95104 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SCAF4O95104 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SCAF4O95104 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms