Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ALX3O95076 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ALX3O95076 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.33■□□□□ 0.69
ALX3O95076 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ALX3O95076 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
ALX3O95076 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ALX3O95076 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.33■□□□□ 0.68
ALX3O95076 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.33■□□□□ 0.68
ALX3O95076 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ALX3O95076 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ALX3O95076 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ALX3O95076 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.32■□□□□ 0.68
ALX3O95076 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALX3O95076 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALX3O95076 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALX3O95076 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALX3O95076 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.32■□□□□ 0.68
ALX3O95076 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.32■□□□□ 0.68
ALX3O95076 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.32■□□□□ 0.68
ALX3O95076 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.32■□□□□ 0.68
ALX3O95076 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALX3O95076 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALX3O95076 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.32■□□□□ 0.68
ALX3O95076 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALX3O95076 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALX3O95076 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALX3O95076 AC079630.1-202ENST00000618127 1840 ntBASIC19.32■□□□□ 0.68
ALX3O95076 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.32■□□□□ 0.68
ALX3O95076 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ALX3O95076 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.31■□□□□ 0.68
ALX3O95076 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ALX3O95076 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALX3O95076 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.31■□□□□ 0.68
ALX3O95076 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.31■□□□□ 0.68
ALX3O95076 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.31■□□□□ 0.68
ALX3O95076 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.31■□□□□ 0.68
ALX3O95076 RARRES2P1-201ENST00000474487 481 ntBASIC19.31■□□□□ 0.68
ALX3O95076 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ALX3O95076 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALX3O95076 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ALX3O95076 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.31■□□□□ 0.68
ALX3O95076 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.3■□□□□ 0.68
ALX3O95076 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALX3O95076 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ALX3O95076 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALX3O95076 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.3■□□□□ 0.68
ALX3O95076 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.3■□□□□ 0.68
ALX3O95076 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALX3O95076 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.3■□□□□ 0.68
ALX3O95076 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.3■□□□□ 0.68
ALX3O95076 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ALX3O95076 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ALX3O95076 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ALX3O95076 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ALX3O95076 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALX3O95076 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.3■□□□□ 0.68
ALX3O95076 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.29■□□□□ 0.68
ALX3O95076 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.29■□□□□ 0.68
ALX3O95076 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALX3O95076 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALX3O95076 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALX3O95076 AC010980.1-201ENST00000587192 1142 ntBASIC19.29■□□□□ 0.68
ALX3O95076 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.29■□□□□ 0.68
ALX3O95076 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ALX3O95076 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ALX3O95076 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ALX3O95076 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
ALX3O95076 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALX3O95076 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.28■□□□□ 0.68
ALX3O95076 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALX3O95076 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALX3O95076 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.28■□□□□ 0.68
ALX3O95076 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALX3O95076 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALX3O95076 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.28■□□□□ 0.68
ALX3O95076 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.28■□□□□ 0.68
ALX3O95076 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ALX3O95076 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ALX3O95076 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.28■□□□□ 0.68
ALX3O95076 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALX3O95076 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALX3O95076 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ALX3O95076 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.27■□□□□ 0.68
ALX3O95076 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ALX3O95076 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALX3O95076 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALX3O95076 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALX3O95076 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.27■□□□□ 0.68
ALX3O95076 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.27■□□□□ 0.68
ALX3O95076 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ALX3O95076 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ALX3O95076 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.27■□□□□ 0.67
ALX3O95076 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALX3O95076 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ALX3O95076 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ALX3O95076 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALX3O95076 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALX3O95076 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.26■□□□□ 0.67
ALX3O95076 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALX3O95076 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms