Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KDM4BO94953 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KDM4BO94953 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.19■□□□□ 0.66
KDM4BO94953 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KDM4BO94953 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KDM4BO94953 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
KDM4BO94953 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KDM4BO94953 YBX1P4-201ENST00000392794 808 ntBASIC19.19■□□□□ 0.66
KDM4BO94953 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
KDM4BO94953 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.19■□□□□ 0.66
KDM4BO94953 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KDM4BO94953 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KDM4BO94953 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KDM4BO94953 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KDM4BO94953 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.19■□□□□ 0.66
KDM4BO94953 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KDM4BO94953 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KDM4BO94953 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KDM4BO94953 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.18■□□□□ 0.66
KDM4BO94953 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KDM4BO94953 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KDM4BO94953 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KDM4BO94953 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KDM4BO94953 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KDM4BO94953 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KDM4BO94953 AC103724.3-201ENST00000564481 992 ntBASIC19.18■□□□□ 0.66
KDM4BO94953 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.18■□□□□ 0.66
KDM4BO94953 AC139530.1-201ENST00000575312 1977 ntBASIC19.18■□□□□ 0.66
KDM4BO94953 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KDM4BO94953 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.18■□□□□ 0.66
KDM4BO94953 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KDM4BO94953 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.18■□□□□ 0.66
KDM4BO94953 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KDM4BO94953 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KDM4BO94953 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KDM4BO94953 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
KDM4BO94953 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
KDM4BO94953 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KDM4BO94953 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.17■□□□□ 0.66
KDM4BO94953 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KDM4BO94953 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KDM4BO94953 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KDM4BO94953 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KDM4BO94953 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KDM4BO94953 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KDM4BO94953 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KDM4BO94953 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.17■□□□□ 0.66
KDM4BO94953 KRT8P33-201ENST00000508125 1423 ntBASIC19.17■□□□□ 0.66
KDM4BO94953 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KDM4BO94953 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KDM4BO94953 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KDM4BO94953 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.16■□□□□ 0.66
KDM4BO94953 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
KDM4BO94953 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KDM4BO94953 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
KDM4BO94953 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KDM4BO94953 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KDM4BO94953 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
KDM4BO94953 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KDM4BO94953 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KDM4BO94953 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
KDM4BO94953 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.16■□□□□ 0.66
KDM4BO94953 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
KDM4BO94953 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
KDM4BO94953 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KDM4BO94953 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDM4BO94953 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDM4BO94953 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KDM4BO94953 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.15■□□□□ 0.66
KDM4BO94953 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDM4BO94953 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
KDM4BO94953 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.15■□□□□ 0.66
KDM4BO94953 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDM4BO94953 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
KDM4BO94953 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
KDM4BO94953 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
KDM4BO94953 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDM4BO94953 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.15■□□□□ 0.66
KDM4BO94953 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDM4BO94953 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KDM4BO94953 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.15■□□□□ 0.66
KDM4BO94953 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
KDM4BO94953 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KDM4BO94953 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KDM4BO94953 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
KDM4BO94953 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KDM4BO94953 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KDM4BO94953 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KDM4BO94953 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KDM4BO94953 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.14■□□□□ 0.65
KDM4BO94953 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KDM4BO94953 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.14■□□□□ 0.65
KDM4BO94953 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.14■□□□□ 0.65
KDM4BO94953 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.14■□□□□ 0.65
KDM4BO94953 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KDM4BO94953 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KDM4BO94953 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KDM4BO94953 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KDM4BO94953 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.14■□□□□ 0.65
KDM4BO94953 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms