Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CLPXO76031 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CLPXO76031 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLPXO76031 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLPXO76031 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLPXO76031 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.88■□□□□ 0.77
CLPXO76031 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CLPXO76031 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLPXO76031 AC010542.4-201ENST00000563151 1910 ntBASIC19.88■□□□□ 0.77
CLPXO76031 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLPXO76031 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLPXO76031 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CLPXO76031 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPXO76031 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPXO76031 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLPXO76031 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CLPXO76031 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPXO76031 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.87■□□□□ 0.77
CLPXO76031 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.87■□□□□ 0.77
CLPXO76031 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLPXO76031 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLPXO76031 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CLPXO76031 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.86■□□□□ 0.77
CLPXO76031 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLPXO76031 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.86■□□□□ 0.77
CLPXO76031 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.86■□□□□ 0.77
CLPXO76031 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLPXO76031 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLPXO76031 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CLPXO76031 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLPXO76031 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLPXO76031 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLPXO76031 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.86■□□□□ 0.77
CLPXO76031 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.86■□□□□ 0.77
CLPXO76031 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLPXO76031 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLPXO76031 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLPXO76031 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CLPXO76031 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLPXO76031 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
CLPXO76031 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLPXO76031 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.85■□□□□ 0.77
CLPXO76031 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPXO76031 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLPXO76031 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLPXO76031 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.85■□□□□ 0.77
CLPXO76031 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLPXO76031 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CLPXO76031 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPXO76031 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CLPXO76031 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.85■□□□□ 0.77
CLPXO76031 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPXO76031 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLPXO76031 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPXO76031 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.84■□□□□ 0.77
CLPXO76031 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLPXO76031 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPXO76031 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CLPXO76031 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
CLPXO76031 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CLPXO76031 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CLPXO76031 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.84■□□□□ 0.77
CLPXO76031 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLPXO76031 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPXO76031 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPXO76031 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CLPXO76031 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CLPXO76031 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLPXO76031 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLPXO76031 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLPXO76031 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CLPXO76031 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.83■□□□□ 0.77
CLPXO76031 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLPXO76031 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLPXO76031 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLPXO76031 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.83■□□□□ 0.77
CLPXO76031 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLPXO76031 TSPY13P-201ENST00000338964 914 ntBASIC19.83■□□□□ 0.77
CLPXO76031 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLPXO76031 AC026202.3-201ENST00000600805 1127 ntBASIC19.83■□□□□ 0.77
CLPXO76031 RAP2CP1-202ENST00000605179 643 ntBASIC19.83■□□□□ 0.77
CLPXO76031 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLPXO76031 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLPXO76031 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.83■□□□□ 0.76
CLPXO76031 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLPXO76031 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLPXO76031 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPXO76031 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPXO76031 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLPXO76031 KRT18P60-201ENST00000312876 1297 ntBASIC19.82■□□□□ 0.76
CLPXO76031 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPXO76031 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPXO76031 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPXO76031 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPXO76031 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPXO76031 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPXO76031 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.81■□□□□ 0.76
CLPXO76031 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLPXO76031 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPXO76031 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms